Job Description P76052 Confidence 100.00% Date Thu Jan 5 12:17:52 GMT 2012 Rank 5 Aligned Residues 374 % Identity 15% Template c3pfoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative acetylornithine deacetylase; PDBTitle: crystal structure of a putative acetylornithine deacetylase (rpa2325)2 from rhodopseudomonas palustris cga009 at 1.90 a resolution Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	I	Y	R	F	I	D	D	A	I	E	A	D	R	Q	R	Y	T	D	I	A	D	Q	I	W	D	H	P	E	T	R	F	E	E	F	W	S	A	E	H	L	A	S	A	L	E	S	A	G	F	T	V	T	R	N	V	G	N	I	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	I	T	Q	S	L	R	A	A	V	D	R	N	F	N	D	Q	V	A	F	L	Q	R	X	V	Q	F	R	S	V	R	G	E	E	A	P	Q	Q	E	W	L	A	Q	Q	F	A	D	R	G	Y	K	V	D	T	F	S	L	A	D	V	D	I	A	S	H	P	K	A	A	P	X	D	T	I	D	P	A	G	S
Template Known Secondary structure																												T	S				T	T																T	T								T	T	T	T	T	G	G	G	S	T	T					T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			64	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.
Predicted Secondary structure		.										.	.																		.																																												.
Query SS confidence		.										.	.																		.																																												.
Query Sequence		.	A	F	I	A	S	F	G	Q	G	.	.	K	P	V	I	A	L	L	G	E	Y	D	A	L	A	G	L	S	.	Q	Q	A	G	C	A	Q	P	T	S	V	T	P	G	E	N	G	H	G	C	G	H	N	L	L	G	T	A	A	F	A	A	A	I	A	V	K	K	W	L	E	Q	Y	.	G	Q	G	G	T	V
Query Conservation		.										.	.																		.																																												.
Alig confidence		.										.	.																		.																																												.
Template Conservation
Template Sequence		X	Q	V	V	A	T	A	D	S	D	G	K	G	R	S	L	I	L	Q	G	H	I	D	V	V	P	E	G	P	V	D	L	W	S	D	P	P	Y	E	A	K	V	R	D	G	W	X	I	G	R	G	A	Q	D	X	K	G	G	V	S	A	X	I	F	A	L	D	A	I	R	T	A	G	Y	A	P	D	A	R	V
Template Known Secondary structure													S	S																	G	G	G		S	S		T	T	T					T	T					T	T	T	T	T	T																	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		R	F	Y	G	C	P	G	E	E	G	G	S	.	G	K	T	F	M	V	R	E	G	V	F	D	D	V	D	A	A	L	T	W	H	P	E	A	F	A	G	M	F	N	T	R	T	L	A	N	I	Q	A	S	W	R	F	K	G	I	A	A	H	A	A	N	S	P	H	L	G	R	S	A	L	D	A	V	T	L	M
Query Conservation														.
Alig confidence														.											.	.																					.	.																			.
Template Conservation																									.	.																					.	.																			.
Template Sequence		H	V	Q	T	V	T	E	E	E	S	T	G	N	G	A	L	S	T	L	X	R	G	Y	.	.	R	A	D	A	C	L	I	P	E	P	T	G	H	T	L	T	R	A	Q	V	.	.	G	A	V	W	F	R	L	R	V	R	G	T	P	V	H	V	A	Y	.	S	E	T	G	T	S	A	I	L	S	A	X	H	L
Template Known Secondary structure							S		T	T	T	T											T		.	.			S									S	S								.	.															B	G	G	G	.	G	G	G	S
Template Predicted Secondary structure																									.	.																					.	.																			.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.													.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Query Sequence		T	T	G	T	N	F	L	N	E	H	I	.	.	.	.	.	.	.	.	.	.	.	.	I	E	K	A	R	V	H	Y	A	I	T	N	S	G	G	I	S	P	N	V	V	Q	A	Q	A	E	V	L	Y	L	I	R	A	P	E	M	T	D	V	Q	H	I	Y	D	R	V	A	K	I	A	E	G	A	A	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.
Template Conservation
Template Sequence		I	R	A	F	E	E	Y	T	K	E	L	N	A	Q	A	V	R	D	P	W	F	G	Q	V	K	N	P	I	K	F	N	V	G	I	I	K	G	G	D	W	A	S	S	T	A	A	W	C	E	L	D	C	R	L	G	L	L	T	G	D	T	P	Q	E	A	X	R	G	I	E	K	C	L	A	D	A	Q	A	T	D
Template Known Secondary structure																G	G	G	S	T	T	T	T	T	S	S	S													S		T	T	B															T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
					283	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.												.
Query SS confidence		.	.	.												.
Query Sequence		.	.	.	L	M	T	E	T	T	V	E	C	R	F	.	D	K	A	C	S	S	Y	L	P	N	R	T	L	E	N	A	M	Y	Q	A	L	S	H	F	G	T	P	E	W	N	S	E	E	L	A	F	A	K	Q	I	Q	A	T	L	T	S	N	D	R	Q	N	S	L	N	N	I	A	A	T	G	G	E	N	G	K
Query Conservation		.	.	.												.
Alig confidence		.	.	.												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	L	S	E	N	P	A	E	L	V	W	S	G	F	Q	A	D	P	A	V	C	E	P	G	G	V	A	E	D	V	L	T	A	A	H	K	A	A	F	N	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S																		T	T																S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	A	L	R	H	R	E	T	V	L	A	N	E	V	A	P	Y	A	A	T	D	N	V	L	A	A	S	T	D	V	G	D	V	S	W	K	L	P	V	A	Q	C	F	S	P	C	F	A	V	G	T	P	L	H	T	W	Q	L	V	S	Q	G	R	T	S	I	A	H	K	G	M	L	L	A	A	K	T	M	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.							.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.							.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	R	L	S	T	A	V	N	D	T	R	Y	Y	S	V	D	Y	G	I	P	A	L	C	Y	G	P	Y	G	Q	G	.	.	P	H	A	F	D	E	.	.	.	.	.	.	R	I	D	L	E	S	L	R	K	T	T	L	S	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S			T																						.	.	T	T	S	T	T		.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.							.	.	.	.	.	.
Template SS confidence
																					368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.							.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		439	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	T	V	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	V	A	E	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.