Job Description P76052 Confidence 99.89% Date Thu Jan 5 12:17:52 GMT 2012 Rank 38 Aligned Residues 311 % Identity 15% Template c3kl9F_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:glutamyl aminopeptidase; PDBTitle: crystal structure of pepa from streptococcus pneumoniae Resolution 2.70 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		Y	T	D	I	A	D	Q	I	W	D	H	P	E	T	R	F	E	E	F	W	S	A	E	H	L	A	S	A	L	E	S	A	G	F	T	V	T	R	N	V	G	N	I	P	N	A	F	I	A	S	F	.	.	.	G	Q	G	K	P	V	I	A	L	L	G	E	Y	D	A	L	A	G	L	S	Q	Q	A	G	C	A
Query Conservation																																																					.	.	.
Alig confidence																																												.	.	.							.	.	.
Template Conservation																																												.	.	.
Template Sequence		L	F	S	K	I	K	E	V	T	E	L	A	A	V	S	G	H	E	A	P	V	R	A	Y	L	R	E	K	L	T	P	H	V	D	E	V	V	T	D	G	L	G	.	.	.	G	I	F	G	I	K	H	S	E	A	V	D	A	P	R	V	L	V	A	S	H	M	D	E	V	G	F	M	V	S	E	I	K	P	D
Template Known Secondary structure											T	S			B	T	T														G	G	G		S						T	T	S	.	.	.										S	T	T												B										T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	T	S	V	T	P	G	E	N	G	H	G	C	G	H	N	L	L	G	T	A	A	F	A	A	A	I	A	V	K	K	W	L	E	Q	Y	G	Q	G	G	T	V	R	F	Y	G	C	P	G	E	E	G	G	S	G	K	T	F	M	V	R	E	G	V	F	D	D	V	D	A	A	L	T	W	H	P	E	A	F
Query Conservation
Alig confidence				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		G	T	.	.	.	.	.	.	F	R	V	V	E	I	G	G	W	N	P	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	S	Q	R	F	K	L	L	T	R	D	G	H	E	I	P	V	I	S	G	P	A	I	A	D	I	V	F	.	D	G	G	F	A	D	K	A	E	A	E	S	F
Template Known Secondary structure		S		.	.	.	.	.	.							S				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S								T	T	S											G	G	G	S			.					S	S							T
Template Predicted Secondary structure				.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		81	.							.	.	.	.	.	.	.	90	.	.	.	.	.																	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.									.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.
Query Sequence		A	G	M	F	N	T	R	T	L	A	N	I	Q	A	S	W	R	F	K	G	I	A	A	H	A	A	N	S	P	H	L	G	R	S	A	L	D	A	V	T	L	M	T	T	G	T	N	F	L	N	E	H	I	I	E	K	A	R	V	H	Y	A	I	T	N	S	G	.	.	.	.	.	.	.	.	G	I	S	P	N
Query Conservation																																																																					.	.	.	.	.	.	.	.
Alig confidence									.	.																																						.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation									.	.																																						.	.	.	.
Template Sequence		G	I	R	P	G	D	T	.	.	I	V	P	D	S	S	A	I	L	T	A	N	E	K	N	I	I	S	K	A	W	D	N	R	Y	G	V	L	M	V	S	E	L	A	E	A	L	.	.	.	.	S	G	Q	K	L	G	N	E	L	Y	L	G	S	N	V	Q	E	E	V	G	L	R	G	A	H	T	S	T	T	K
Template Known Secondary structure		T			T	T			.	.											T	T	S	S					S																		T	.	.	.	.	S	S				S	S								S			T	T	T	S
Template Predicted Secondary structure									.	.																																						.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Q	A	Q	A	E	V	L	Y	L	I	R	A	P	E	M	T	D	V	Q	H	I	Y	D	R	V	A	K	I	A	E	G	A	A	L	M	T	E	T	T	V	E	C	R	F	D	K	A	C	S	S	Y	L	P	N	R	T	L	E	N	A	M	Y	Q	A	L	S	H	F	G	T	P	E	W	N	S	E	E	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																				.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																				.	.	.	.	.	.
Template Sequence		F	D	P	E	V	F	L	A	V	D	C	S	P	A	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	G	Q	G	K	I	G	D	G	T	L	I	R	F	Y	D	P	G	H	L	L	.	.	L	P	G	M	K	D	F	L	L	T	T	A	E	E	A	G	I	K	Y	.	.	.	.	.	.
Template Known Secondary structure					S												G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T		S			T	T	S									T	T				.	.															T	T				.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																				.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.															.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		A	F	A	K	Q	I	Q	A	T	L	T	S	N	D	R	Q	N	S	L	N	N	I	A	A	T	G	G	E	N	G	K	V	F	A	L	R	H	R	E	T	V	L	A	N	E	V	A	P	Y	A	A	T	D	N	V	L	A	A	S	T	D	V	G	D	V	S	W	K	.	.	.	L	P	V	A	Q	C	F	S	P
Query Conservation																																																																						.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	Y	C	G	K	G	G	T	D	A	G	A	A	H	L	K	N	G	G	V	P	S	T	T	I	G	V	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S			T					T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																					285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	A	V	G	T	P	L	H	T	W	Q	L	V	S	Q	G	R	T	S	I	A	H	K	G	M	L	L	A	A	K	T	M	A	A	T	T	V	N	L
Query Conservation
Alig confidence					.	.	.	.							.	.	.	.	.	.
Template Conservation					.	.	.	.							.	.	.	.	.	.
Template Sequence		A	R	Y	.	.	.	.	I	H	S	H	Q	T	.	.	.	.	.	.	L	Y	A	M	D	D	F	L	E	A	Q	A	F	L	Q	A	L	V	K	K	L
Template Known Secondary structure			B	T	.	.	.	.		S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.							.	.	.	.	.	.
Template SS confidence
		314	.	.					.	.	.	320	.	.							.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low