Job Description P76052 Confidence 100.00% Date Thu Jan 5 12:17:52 GMT 2012 Rank 10 Aligned Residues 355 % Identity 13% Template c3gb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution Resolution 2.04 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.													.	.	.
Query SS confidence																																													.	.	.	.	.													.	.	.
Query Sequence		D	R	Q	R	Y	T	D	I	A	D	Q	I	W	D	H	P	E	T	R	F	E	E	F	W	S	A	E	H	L	A	S	A	L	E	S	A	G	F	T	V	T	R	N	.	.	.	.	.	V	G	N	I	P	N	A	F	I	A	S	F	.	.	.	G	Q	G	K	P	V	I	A	L	L	G	E	Y	D	A	L	A
Query Conservation																																													.	.	.	.	.													.	.	.
Alig confidence																																													.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		N	Q	E	R	L	V	N	E	F	X	E	L	V	Q	V	D	S	E	T	K	F	E	A	E	I	C	K	V	L	T	K	K	F	T	D	L	G	V	E	V	F	E	D	D	T	X	A	V	T	G	H	G	A	G	N	L	I	C	T	L	P	A	T	K	D	G	V	D	T	I	Y	F	T	S	H	X	D	T	V	V
Template Known Secondary structure															T	S			B	T	T																T	T							S								S	S										S	S	T	T												B		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		G	L	S	Q	Q	A	G	C	A	Q	P	T	S	V	T	P	G	E	N	G	H	G	C	G	H	.	.	.	.	N	L	L	G	T	A	A	F	A	A	A	I	A	V	K	K	W	L	E	Q	Y	G	Q	G	G	T	V	R	F	Y	G	C	P	G	E	E	G	G	S	G	K	T	F	M	V	R	E	G	V	F	D
Query Conservation																											.	.	.	.
Alig confidence		.	.	.	.	.	.																				.	.	.	.																																																			.
Template Conservation		.	.	.	.	.	.																																																																										.
Template Sequence		.	.	.	.	.	.	P	G	N	G	I	K	P	S	I	K	D	G	Y	I	V	S	D	G	T	T	I	L	G	A	D	D	K	A	G	L	A	S	X	F	E	A	I	R	V	L	K	E	K	N	I	P	H	G	T	I	E	F	I	I	T	V	G	E	E	S	G	L	V	G	A	K	A	L	D	R	E	R	I	.
Template Known Secondary structure		.	.	.	.	.	.	S		S	S							T	T						S	S	S																							T	T												S		G	G	G	T	S						S		G	G	G		.
Template Predicted Secondary structure		.	.	.	.	.	.																																																																										.
Template SS confidence
								83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	A	A	L	T	W	H	P	E	A	F	A	G	M	F	N	T	R	T	L	A	N	I	Q	A	S	W	R	F	K	G	I	A	A	H	A	A	N	S	P	H	L	G	R	S	A	L	D	A	V	T	L	M	T	T	G	T	N	F	L	N	E	H	I	I	E	K	A	R	V	H	Y	A	I	T	N	S	G
Query Conservation
Alig confidence																																																									.	.	.
Template Conservation																																																									.	.	.
Template Sequence		T	A	K	Y	G	Y	A	L	D	S	D	G	K	V	G	E	I	V	V	A	A	P	T	Q	A	K	V	N	A	I	I	R	G	K	T	A	H	A	G	V	A	P	E	K	G	V	S	A	I	T	I	A	A	K	A	.	.	.	I	A	K	X	P	L	G	R	I	D	S	E	T	T	A	N	I	G	R	F	E	G
Template Known Secondary structure				S									S		T	T																			B			B	T	T	T		G	G	G	S	B										.	.	.		T	T	S							T	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		G	I	S	P	N	V	V	Q	A	Q	A	E	V	L	Y	L	I	R	A	P	E	M	T	D	V	Q	H	I	Y	D	R	V	A	K	I	A	E	G	A	A	L	M	T	E	T	T	V	E	C	R	F	D	K	A	C	S	S	Y	L	P	.	.	N	R	T	L	E	N	A	M	Y	Q	A	L	S	H	F	G	T	P
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		G	T	Q	T	N	I	V	C	D	H	V	Q	I	F	A	E	A	R	S	L	I	N	E	K	X	E	A	Q	V	A	K	X	K	E	A	F	E	T	T	A	K	E	X	G	G	H	A	D	V	E	V	N	V	X	Y	P	G	F	K	F	A	D	G	D	H	V	V	E	V	A	K	R	A	A	E	K	I	G	R	T
Template Known Secondary structure			S		T	T	B														S	S																						T	T																		T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		E	W	N	S	E	E	L	A	F	A	K	Q	I	Q	A	T	L	T	S	N	D	R	Q	N	S	L	N	N	I	A	A	T	G	G	E	N	G	K	V	F	A	L	R	H	R	E	T	V	L	A	N	E	V	A	P	Y	A	A	T	D	N	V	L	A	A	S	T	D	V	G	D	V	S	W	K	.	L	P	V	A
Query Conservation																																																																													.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	H	Q	S	G	G	G	S	D	A	N	V	I	A	G	H	G	I	P	T	V
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S										T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		313																																																										.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	F	S	P	C	F	A	V	G	T	P	L	H	T	W	Q	L	V	S	Q	G	R	T	S	I	A	H	K	G	M	L	L	A	A	K	T	M	A	A	T	T	V	N	L	F	L
Query Conservation
Alig confidence							.	.	.	.										.	.	.	.	.	.
Template Conservation							.	.	.	.										.	.	.	.	.	.
Template Sequence		N	L	A	V	G	.	.	.	.	Y	E	E	I	H	T	T	N	E	.	.	.	.	.	.	K	I	P	V	E	E	L	A	K	T	A	E	L	V	V	A	I	I	E	E	V	A	K
Template Known Secondary structure							.	.	.	.		B	S	T	T	S	T	T		.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.										.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340					.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.