Job Description P76052 Confidence 100.00% Date Thu Jan 5 12:17:52 GMT 2012 Rank 4 Aligned Residues 363 % Identity 21% Template c2q43A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:iaa-amino acid hydrolase ilr1-like 2; PDBTitle: ensemble refinement of the protein crystal structure of iaa-aminoacid2 hydrolase from arabidopsis thaliana gene at5g56660 Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	D	A	I	E	A	D	R	Q	R	Y	T	D	I	A	D	Q	I	W	D	H	P	E	T	R	F	E	E	F	W	S	A	E	H	L	A	S	A	L	E	S	A	G	F	T	V	T	R	N	V	G	N	I	P	N	A	F	I	A	S	F	G	Q	G	K	.	P	V	I	A	L	L	G	E	Y	D	A	L	A	G
Query Conservation																																																																			.
Alig confidence																																																						.	.												.
Template Conservation																																																						.	.
Template Sequence		F	A	K	S	P	E	V	F	D	W	M	V	K	I	R	R	K	I	H	E	N	P	E	L	G	Y	E	E	L	E	T	S	K	L	I	R	S	E	L	E	L	I	G	I	K	Y	R	Y	P	V	A	I	.	.	T	G	V	I	G	Y	I	G	T	G	E	P	P	F	V	A	L	R	A	D	M	D	A	L	P	I
Template Known Secondary structure					S																	S				T	T																	T								T	T	.	.	T								S	S	S	S												B	S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	Q	A	G	C	A	Q	P	T	S	V	T	P	G	E	N	G	H	G	C	G	H	N	L	L	G	T	A	A	F	A	A	A	I	A	V	K	K	W	L	E	Q	Y	G	Q	G	G	T	V	R	F	Y	G	C	P	G	E	E	G	G	S	G	K	T	F	M	V	R	E	G	V	F	D	D	V	D	A	A
Query Conservation
Alig confidence												.	.	.																																.	.
Template Conservation												.	.	.																																.	.
Template Sequence		Q	E	G	V	E	W	E	H	K	S	.	.	.	K	I	A	G	K	M	H	A	C	G	H	D	G	H	V	T	M	L	L	G	A	A	K	I	L	H	E	H	R	H	H	.	.	L	Q	G	T	V	V	L	I	F	Q	P	A	E	E	G	L	S	G	A	K	K	M	R	E	E	G	A	L	K	N	V	E	A	I
Template Known Secondary structure							S	T	T	S		.	.	.	S	S	T	T		B		T	T	S																		T	G	G	G	.	.		S	S										T	T	T	T									T	T	T	T	T	T
Template Predicted Secondary structure												.	.	.																																.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	W	H	P	E	A	F	A	G	M	F	N	T	R	T	L	A	N	I	Q	A	S	W	R	F	K	G	I	A	A	H	A	A	N	S	P	H	L	G	R	S	A	L	D	A	V	T	L	M	T	T	G	T	N	F	L	N	E	H	I	I	E	K	A	R	V	H	Y	A	I	T	N	S	G	G	I	S	P	N
Query Conservation
Alig confidence									.	.	.																										.																																						.	.	.	.	.	.
Template Conservation									.	.	.																										.																																						.	.	.	.	.	.
Template Sequence		F	G	I	H	L	S	A	.	.	.	R	I	P	F	G	K	A	A	S	R	A	G	S	F	L	A	G	A	G	V	F	E	A	V	I	.	T	G	K	T	I	D	P	V	V	A	A	S	S	I	V	L	S	L	Q	Q	L	V	S	R	E	T	D	P	L	D	S	K	V	V	T	V	S	.	.	.	.	.	.	K
Template Known Secondary structure									.	.	.				T	T						S							B								.																							B			S	S	T	T	S								.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																										.																																						.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.							.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		V	V	Q	A	Q	A	E	V	L	Y	L	I	R	A	P	E	M	T	D	.	.	V	Q	H	I	Y	D	R	V	A	K	I	A	E	G	A	A	L	M	T	E	T	T	V	E	C	R	F	D	K	A	C	S	S	Y	L	P	N	R	T	L	E	N	A	M	Y	Q	A	L	S	H	F	G	T	P	E	W	N	S	E
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		V	N	P	D	S	I	T	I	G	G	T	L	R	A	F	T	G	F	T	Q	L	Q	Q	R	V	K	E	V	I	T	K	Q	A	A	V	H	R	C	N	A	S	V	N	L	T	P	N	G	R	E	P	M	P	P	T	V	N	N	K	D	L	Y	K	Q	F	K	K	V	V	R	D	L	L	G	Q	E	A	F	V	E
Template Known Secondary structure																S	S																			T	T	T							S	S	G	G	G				B																					T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	F	A	K	Q	I	Q	A	T	L	T	S	N	D	R	Q	N	S	L	N	N	I	A	A	T	G	G	E	N	G	K	V	F	A	L	R	H	R	E	T	V	L	A	N	E	V	A	P	Y	A	A	T	D	N	V	L	A	A	S	T	D	V	G	D	V	S	W	K	L	P	V	A	Q	C	F	S	P	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	P	V	M	G	S	E	D	F	S	Y	F	A	E	T	I	P	G	H	F	S	L	L	G	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B					T	T					T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																								340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		406	.	.	.	410	.	.				.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		F	A	V	G	T	P	L	.	.	.	H	T	W	Q	L	V	S	Q	G	R	T	S	I	A	H	K	G	M	L	L	A	A	K	T	M	A	A	T	T	V	N	L	F	L	D	S
Query Conservation									.	.	.
Alig confidence									.	.	.						.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		Q	D	E	T	N	G	Y	A	S	S	H	S	P	L	Y	.	.	.	.	.	.	R	I	N	E	D	V	L	P	Y	G	A	A	I	H	A	S	M	A	V	Q	Y	L	K	E	K
Template Known Secondary structure				T	T			S			S	S	S	T	T		.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380							.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.