Job Description P76052 Confidence 99.79% Date Thu Jan 5 12:17:52 GMT 2012 Rank 47 Aligned Residues 307 % Identity 13% Template c1vhoA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of a putative peptidase/endoglucanase Resolution 1.86 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																						.																		.
Query SS confidence																																																						.																		.
Query Sequence		R	Y	T	D	I	A	D	Q	I	W	D	H	P	E	T	R	F	E	E	F	W	S	A	E	H	L	A	S	A	L	E	S	A	G	F	T	V	T	R	N	V	G	N	I	P	N	A	F	I	A	S	F	.	G	Q	G	K	P	V	I	A	L	L	G	E	Y	D	A	L	A	.	G	L	S	Q	Q	A	G	C	A
Query Conservation																																																						.																		.
Alig confidence																																													.	.	.							.																		.
Template Conservation																																													.	.	.
Template Sequence		E	T	G	K	L	L	X	E	L	S	N	L	D	G	P	S	G	Y	E	T	N	V	V	S	Y	I	K	S	V	I	E	P	F	V	D	E	A	K	T	T	R	H	G	.	.	.	S	L	I	G	Y	K	K	G	K	G	I	G	K	L	A	F	F	A	H	V	D	E	I	G	F	V	V	S	K	V	E	G	Q	F
Template Known Secondary structure													S			B	T	T														G	G	G		S						T	T	S	.	.	.									S	S	S											B										T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	T	S	V	T	P	G	E	N	G	H	G	C	G	H	N	L	L	G	T	A	A	F	A	A	A	I	A	V	K	K	W	L	E	Q	Y	G	Q	G	G	T	V	R	F	Y	G	C	P	G	E	E	G	G	S	G	K	T	F	M	V	R	E	G	V	F	D	D	V	D	A	A	L	T	W	H	P	E	A	F
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	L	E	P	V	Y	A	S	K	V	R	I	Y	T	K	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	R	G	V	I	G	X	L	A	P	H	L	Q	D	S	E	S	R	K	K	V	P	T	Y	D	E	I	F	V	D	L	S	L	C	E	R
Template Known Secondary structure																	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T				S										T	S			T	T						G	G	G	S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		A	G	M	F	N	T	R	T	L	A	N	I	Q	A	S	W	R	F	K	G	I	A	A	H	A	A	N	S	P	H	L	G	R	S	A	L	D	A	V	T	L	M	T	T	G	T	N	F	L	N	E	H	I	I	E	K	A	R	V	H	Y	A	I	T	N	S	.	.	.	.	.	.	.	G	G	I	S	P	N	V
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence									.	.																		.	.																				.	.	.	.																.	.	.	.	.	.	.
Template Conservation									.	.																		.	.																				.	.	.	.
Template Sequence		G	V	R	V	G	D	I	.	.	A	V	I	D	Q	T	A	F	E	T	N	G	K	V	V	G	K	.	.	A	L	D	N	R	A	S	C	G	V	L	V	K	V	L	E	F	L	K	.	.	.	.	R	Y	D	H	P	W	D	V	Y	V	V	F	S	V	Q	E	E	T	G	C	L	G	A	L	T	G	A	Y	E
Template Known Secondary structure					T	T			.	.											T	T					T	.	.	T																		T	.	.	.	.	T				S	S									T	T	S	S	S							T	T
Template Predicted Secondary structure									.	.																		.	.																				.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	Q	A	E	V	L	Y	L	I	R	A	P	E	M	T	D	V	Q	H	I	Y	D	R	V	A	K	I	A	E	G	A	A	L	M	T	E	T	T	V	E	C	R	F	D	K	A	C	S	S	Y	L	P	N	R	T	L	E	N	A	M	Y	Q	A	L	S	H	F	G	T	P	E	W	N	S	E	E	L	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		I	N	P	D	A	A	I	V	X	D	V	T	F	A	S	E	P	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	D	H	I	E	L	G	K	G	P	V	I	G	L	G	P	V	V	.	.	.	.	.	D	R	N	L	V	Q	K	I	I	E	I	A	K	K	H	N	V	S	L	.	.	.	.	.	.	.
Template Known Secondary structure					S													T	T	S		.	.	.	.	.	.	.	.	.	.	.	.					T	T	S							S	T	T	S	.	.	.	.	.															T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.													.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		F	A	K	Q	I	Q	A	T	L	T	S	N	D	R	Q	N	S	L	N	N	I	A	A	T	G	G	E	N	G	K	V	F	A	L	R	H	R	E	T	V	L	A	N	E	V	A	P	Y	A	A	T	D	N	V	L	A	A	S	T	D	V	G	D	V	S	W	K	.	L	P	V	A	Q	C	F	S	P	C	F	A
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	E	A	V	G	G	R	T	D	F	V	Q	L	V	R	N	G	V	R	T	S	L	I	S	I	P	L	K	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S					T	T						T	T											B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																				272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	P	L	H	T	W	Q	L	V	S	Q	G	R	T	S	I	A	H	K	G	M	L	L	A	A	K	T	M	A	A	T	T	V	N	L
Query Conservation
Alig confidence		.	.	.	.							.	.	.	.	.	.
Template Conservation		.	.	.	.							.	.	.	.	.	.
Template Sequence		.	.	.	.	X	H	T	P	V	E	.	.	.	.	.	.	X	V	D	P	R	D	V	E	E	L	A	R	L	L	S	L	V	A	V	E	L
Template Known Secondary structure		.	.	.	.	T	T	S	T	T		.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.							.	.	.	.	.	.
Template SS confidence
						306	.	.	.	310	.							.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions