Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence98.87%DateThu Jan 5 11:16:24 GMT 2012
Rank159Aligned Residues158
% Identity21%Templated2f9la1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
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Template Sequence  FKVVLIGDSGVGKSNLLSRFTRNEFNLSTIGVEFATRSIQVDGKT. . . . . . . . . . . . . . . . . . IKAQIWDTAGQERYRRI
Template Known Secondary structure  SSTTSSS






S
TT..................
SSGGGTT

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   12.......20.........30.........40.........50...... ...60.........70...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
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Template Sequence  TSAYY. . . . . . . RGAVGALLVYDIAKHLTYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
.......TT
STT
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   77..80. ........90.........100
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAVEA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . NVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSAL. . .
Template Known Secondary structure  .....................TS
TT

TT
GGG

S
TT


TT...
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   101........110.........120.........130.........140.........150......
 
   243......250.........260.........270.......
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Query Sequence  DIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
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Template Sequence  . . . . . . . . . . . . . . . . . . . DSTNVEEAFKNILTEI
Template Known Secondary structure  ...................T
TT
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   157..160.........170..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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