Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence99.56%DateThu Jan 5 11:16:24 GMT 2012
Rank45Aligned Residues168
% Identity20%Templated2cxxa1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKG
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Template Sequence  TIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKN. . . . . . . . . . . . . . . . . . . . . HKIIDXPGFGFXXGLP
Template Known Secondary structure  BTTSSS


SSSSSTT
TTS
TT.....................


BS

TTS
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   3......10.........20.........30.........40..... ....50.........60.
 
   84. ....90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  EG. . . . . . . . LGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGD
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Template Sequence  KEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGG

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   62.......70.........80.........90....
 
   156...160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  KDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSV. . .
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Template Sequence  . . . . . . . . . . . . . . . . APEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDK
Template Known Secondary structure  ................TT


TT


GGG
S
T

GGG
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   95....100.........110.........120.........130.........140.........150........
 
   233......240.........250.........260.........270.......
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Query Sequence  . VVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
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Template Sequence  VFIPISAK. . . . . . . . . . . . . . . . . . . . . . FGDNIERLKNRIFEVI
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TT
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   159160...... ...170.........180..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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