Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence99.51%DateThu Jan 5 11:16:24 GMT 2012
Rank52Aligned Residues191
% Identity17%Templated2c78a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
Query Conservation   





 












     
   




 
  
 
 
 
     
             
 


 



 

  
Alig confidence 








































































.......
Template Conservation    
 


    






 
                                                 
   .......
Template Sequence  VNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPG. . . . . . .
Template Known Secondary structure 
STTSSS
TTS



S
ST


S

SS



.......
Template Predicted Secondary structure 

































.......
Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
Query Conservation 
 


  

  

 

 

 


              


 

  
  

    
    
    
    
          
Alig confidence 

























......................................................
Template Conservation                    
 
     ......................................................
Template Sequence  HADYIKNMITGAAQMDGAILVVSAAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SGGGTT
SSTTT......................................................
Template Predicted Secondary structure 







......................................................
Template SS confidence 















































































   85....90.........100.........110
 
   163......170.........180.........190.........200.........210.........220........ .230....
Predicted Secondary structure 




























........


Query SS confidence 

































































. . . . . . . .





Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAK. . . . . . . . EGSVVV
Query Conservation    
      
              
   
     
  

 
 
 

 
           
      ........     
Alig confidence  ...................














































........





Template Conservation  ...................                    
 




 
          
                   

Template Sequence  . . . . . . . . . . . . . . . . . . . GPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVI
Template Known Secondary structure  ...................


TT



GGG


TTS
TTTS
Template Predicted Secondary structure  ...................





















Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.
 
   235....240.........250.........260.........270.......
Predicted Secondary structure 







Query SS confidence 










































Query Sequence  PVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
Query Conservation    

  
  
  
  

   

         
  

      
Alig confidence 
















....





















Template Conservation    

  
          ....          
  

  
    
Template Sequence  RGSALLALEQMHRNPKT. . . . RRGENEWVDKIWELLDAIDEYI
Template Known Secondary structure 


TT
....
TTS
S
Template Predicted Secondary structure 






....





Template SS confidence 










































   172.......180........ .190.........200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions