Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence99.13%DateThu Jan 5 11:16:24 GMT 2012
Rank121Aligned Residues146
% Identity16%Templated2akab1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60...
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Query Sequence  KCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRT. . . . . . . . . . . . . . . . . . . .
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Template Sequence  QIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTN
Template Known Secondary structure  BTTS
TS

S


SS
S
SS

SS
TTSTT

B


SST
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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   64.....70.........80..... ....90.........100 .........110.........120.
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Query Sequence  . . . . . . . . . . . . . . . LPTTMEFVDIAGLVKGASKGEG. . . . . . LGNQFLTNIRETEAI. GHVVRCFENDNIIHVSGKVNP
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Template Sequence  KGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANS. . . . . . . . . . . . .
Template Known Secondary structure  T


S

TT

S


B
SS

SSS
TTTSTTSSS.............
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   113......120.........130.........140.........150.........160.........170.........
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  ADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DLANSDALKIAKEVDPQGQR
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GGG

TT
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   180.........190.........
 
   202.......210.........220..
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Query Sequence  TMYIANVNEDGFENNPYLDQV
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Template Sequence  TIGVITKLDLMDEGTDARDVL
Template Known Secondary structure 
GGGS
TT


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   200.........210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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