Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence98.56%DateThu Jan 5 11:16:24 GMT 2012
Rank227Aligned Residues158
% Identity21%Templated2a5da1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
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Template Sequence  MRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVK. . . . . . . . . . . . . . . . . . . . FNVWDVGGQDKIRPL
Template Known Secondary structure 
STTSSSS






SSTT....................

SGGGGGG
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   14.....20.........30.........40.........50........ .60.........70...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
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Template Conservation       .......              ......................................................
Template Sequence  WRHYY. . . . . . . TGTQGLIFVVDCAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GGGG
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TT
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   74.... .80.........90..
 
   163......170.........180.........190.........200.........210....... ..220.........230.........
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Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNP. . . YLDQVREIAAKEGSVVVPVCAA
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Template Conservation  ...............                              
 
                           
 


Template Sequence  . . . . . . . . . . . . . . . RDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAT
Template Known Secondary structure  ...............GGGTSGGGTT

TTSTT


TTGGG

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BTT
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   93......100.........110.........120.........130.........140.........150.......
 
   240.........250.........260.........270........
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Query Sequence  VEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . SGDGLYEGLTWLTSNYK
Template Known Secondary structure  ......................TTBT

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   158.160.........170....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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