Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence99.64%DateThu Jan 5 11:16:24 GMT 2012
Rank40Aligned Residues177
% Identity15%Templated1tq4a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50.........60.........70.........80.
Predicted Secondary structure 








.







































Query SS confidence 
























.





















































Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGI. EAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGAS
Query Conservation   





 












    . 
   




 
  
 
 
 
     
             
 


 



 

 
Alig confidence 
























.





















..................













Template Conservation 
 


 
    








 
                          ..................
 
 



      
Template Sequence  LNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVMERHPYKHPNIPN. . . . . . . . . . . . . . . . . . VVFWDLPGIGSTNF
Template Known Secondary structure 
TTSST

TTSTTS








SS
TT..................


GGGSS
Template Predicted Secondary structure 
























..................








Template SS confidence 















































































   70.........80.........90.........100.........110....... ..120.........130.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  KGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAE
Query Conservation   
 


  

  

 

 

 


              


 

  
  

    
    
    
    
         
Alig confidence 









..












.......................................................
Template Conservation            ..    
  
 
 
 .......................................................
Template Sequence  PPDTYLEKMK. . FYEYDFFIIISAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TT..GGG
SSS.......................................................
Template Predicted Secondary structure 
..







.......................................................
Template SS confidence 















































































   136...140..... ....150........
 
   162.......170.........180.........190.........200.........210...... ...220...
Predicted Secondary structure 



























..................
Query SS confidence 






















































. . . . . . . . . . . . . . . . . .






Query Sequence  LAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENN. . . . . . . . . . . . . . . . . . PYLDQVR
Query Conservation     
      
              
   
     
  

 
 
 

 
      ..................     
 
Alig confidence  ....................
















.
















..................






Template Conservation  ....................            
    .     



 
                      
        
Template Sequence  . . . . . . . . . . . . . . . . . . . . RFKKNDIDIAKAISMMK. KEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTF
Template Known Secondary structure  ....................


TT.


TT

TT

Template Predicted Secondary structure  ....................




.









Template SS confidence 















































































   159160.........170..... ....180.........190.........200.........210.......
 
   224.....230........ .240.........250.........260.........270.....
Predicted Secondary structure 




..........





Query SS confidence 














. . . . . . . . . .




































Query Sequence  EIAAKEGSVVVPVCA. . . . . . . . . . AVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYK
Query Conservation            
  

..........  
  
  
  

   

         
  

     
Alig confidence 














..........




































Template Conservation           
  

           
   
   
           
        
 
     
Template Sequence  RENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDLPIYKRHNFMVSLPNITDSVIEKKRQFLK
Template Known Secondary structure  TT
SS



TT
TTSTTS
GGGS


S
Template Predicted Secondary structure 














Template SS confidence 





























































   218.220.........230.........240.........250.........260.........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions