Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence99.20%DateThu Jan 5 11:16:24 GMT 2012
Rank108Aligned Residues173
% Identity16%Templated1s0ua3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50....... ..60.........70.........80
Predicted Secondary structure 








.






















.















Query SS confidence 
























.





























.






















Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGI. EAANFPFCTIEPNTGVVPMPDPRLDQLAEI. VKPQRTLPTTMEFVDIAGLVKGA
Query Conservation   





 












    . 
   




 
  
 
 
 
     
   .          
 


 



 

Alig confidence 
























.





























.


















....
Template Conservation 
 
 


  
 






 
                                                   
    ....
Template Sequence  VNIGMVGHVDHGKTSLTKALTGVWTDRGISIRLGYADCEIRKCPQCGTYTTKPRCPNCLAETEFLRRVSFVDSPGH. . . .
Template Known Secondary structure  S
TTSSS











TTT

SSSB
TTS

B

SS....
Template Predicted Secondary structure 































....
Template SS confidence 















































































   38.40.........50.........60.........70.........80.........90.........100.........110...
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  SKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
Query Conservation    
 


  

  

 

 

 


              


 

  
  

    
    
    
    
        
Alig confidence  ...



























.................................................
Template Conservation  ...                   

       .................................................
Template Sequence  . . . ETLMATMLSGASLMDGAILVIAANEPCP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ...TT
S

STTS
SS.................................................
Template Predicted Secondary structure  ...










.................................................
Template SS confidence 















































































   121........130.........140........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV
Query Conservation      
      
              
   
     
  

 
 
 

 
           
           
  

  
Alig confidence  .......................




























.

























.
Template Conservation  .......................                          
  .           
           

 .
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . QPQTKEHLMALEILGIDKIIIVQNKIDLV. DEKQAEENYEQIKEFVKGTIAENAPI.
Template Known Secondary structure  .......................
TT



TTSS.
TTTTTTTTSTTTT

.
Template Predicted Secondary structure  .......................










.






.
Template SS confidence 















































































   149150.........160.........170....... ..180.........190.........200...
 
   241........250.........260.........270.......
Predicted Secondary structure 






Query SS confidence 




































Query Sequence  EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
Query Conservation 
  
  
  

   

         
  

      
Alig confidence  .....................















Template Conservation  .....................    

 
 
 
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . IPINIDVLLKAIQDFI
Template Known Secondary structure  .....................

S
Template Predicted Secondary structure  .....................




Template SS confidence 




































   204.....210.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions