Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence98.86%DateThu Jan 5 11:16:24 GMT 2012
Rank160Aligned Residues161
% Identity23%Templated1r2qa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
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Template Sequence  FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD. . . . . . . . . . . . . . . . . TTVKFEIWDTAGQERYH
Template Known Secondary structure 
STTSSS


TT



SSTT.................

SGGGG
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   21........30.........40.........50.........60...... ...70.........80...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
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Template Sequence  SLAPMYY. . . . . RGAQAAIVVYDITNEESFA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  GG.....TT
STT
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   84.....90 .........100.........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAVEA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . RAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAK. . .
Template Known Secondary structure  .....................S
TT

GGGGGG

S
TT


TT...
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   110.........120.........130.........140.........150.........160.....
 
   243......250.........260.........270.......
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Query Sequence  DIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
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Template Sequence  . . . . . . . . . . . . . . . . . . . TSMNVNEIFMAIAKKL
Template Known Secondary structure  ...................T
TTTS
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   166...170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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