Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence99.32%DateThu Jan 5 11:16:24 GMT 2012
Rank88Aligned Residues148
% Identity17%Templated1puia_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
Query Conservation   





 












     
   




 
  
 
 
 
     
             
 


 



 

  
Alig confidence 

































...............................














Template Conservation   

 


  








 
              ...............................               
Template Sequence  IEVAFAGRSNAGKSSALNTLTNQQLINLFEVADG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KRLVDLPGYGEMKRK
Template Known Secondary structure 
TTSSTTT




TT...............................






Template Predicted Secondary structure 


















...............................





Template SS confidence 















































































   27..30.........40.........50.........60 .........70.....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
Query Conservation 
 


  

  

 

 

 


              


 

  
  

    
    
    
    
          
Alig confidence 

























......................................................
Template Conservation                            ......................................................
Template Sequence  WQRALGEYLEKRQSLQGLVVLMDIRH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TTTTS......................................................
Template Predicted Secondary structure 










......................................................
Template SS confidence 















































































   95....100.........110.........120
 
   163......170.........180.........190.........200.........210... ......220......... 230........
Predicted Secondary structure 
























..




..


Query SS confidence 


















































. .















. .








Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGF. . ENNPYLDQVREIAAKE. . GSVVVPVCA
Query Conservation    
      
              
   
     
  

 
 
 

 
   ..        
       ..    
  

Alig confidence  ....................






























..















..








Template Conservation  ....................                    
      
                           
 


Template Sequence  . . . . . . . . . . . . . . . . . . . . PLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSS
Template Known Secondary structure  ....................


TT


GGGS
GGG
S

BT
Template Predicted Secondary structure  ....................




















Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180
 
   239240.........250.........260.........270.......
Predicted Secondary structure 






Query SS confidence 






































Query Sequence  AVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
Query Conservation    
  
  
  

   

         
  

      
Alig confidence 
......................















Template Conservation 
...................... 
 

  
   
   
Template Sequence  L. . . . . . . . . . . . . . . . . . . . . . KKQGVDKLRQKLDTWF
Template Known Secondary structure  T......................TTBS
Template Predicted Secondary structure 
......................




Template SS confidence 






































   181 ........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions