Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence98.72%DateThu Jan 5 11:16:24 GMT 2012
Rank197Aligned Residues163
% Identity18%Templated1gota2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
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Template Sequence  VKLLLLGAGESGKSTIVKQXKII. . . . . . . HQDGYSLEETQFSFKD. . . . . . . . . . . . . . . . . LNFRXFDVGGQRSERKK
Template Known Secondary structure  STTSS.......S






TT.................

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GGG
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   30.........40.........50.. .......60........ .70.........80.....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
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Template Sequence  WIHCF. . . . . . . EGVTAIIFCVALSDYDLVLAEDEEXNRXHESXKLFDSIC. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TGGGG.......TT
SGGGGG
B
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   207..210. ........220.........230.........240.........250
 
   163......170.........180.........190.........200.........210. ........220...
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Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNED. . . . . . . . . . . . . . . . . . . GFENNPYLDQVR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAGNYIK
Template Known Secondary structure  ..............................T
GGGTT

TTTS
GGGT
TT

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   251........260.........270.........280.........290.........300
 
   224.... .230.........240.........250.........260.........270.......
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Query Sequence  EIAAK. . . . . . . EGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
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Template Sequence  VQFLELNXRRDVKEIYSHXTCA. . . . . . . . . . . . . . . . . . . . . . TDTQNVKFVFDAVTDII
Template Known Secondary structure  TT


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T......................T
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   301........310.........320.. .......330.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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