Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU2
Confidence98.30%DateThu Jan 5 11:16:24 GMT 2012
Rank253Aligned Residues105
% Identity16%Templatec3zvrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of dynamin
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20...... ...30.........40.........50.........60......
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Query Sequence  KCGIVGLPNVGKSTLFNALTKAG. IEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPT. . . . . . . . . . . . . . . .
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Template Sequence  QIAVVGGQSAGKSSVLENFVGRDFLPRGSG. IVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGT
Template Known Secondary structure 
TTT
SS

S

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S
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STTTT

B


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   33......40.........50.........60.. .......70.........80.........90.........100.........110.
 
   67..70.........80... ......90........ .100.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . TMEFVDIAGLVKGASKG. . . . . . EGLGNQFLTNIRETE. AIGHVVRCFEN
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Template Sequence  NKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSD
Template Known Secondary structure  TT


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   112.......120.........130.........140.........150.........160.........170.........180
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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