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Job DescriptionP0ABU2
Confidence99.45%DateThu Jan 5 11:16:24 GMT 2012
Rank61Aligned Residues172
% Identity15%Templatec3t1tC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:gliding protein mgla; PDBTitle: mgla bound to gdp in p1 tetrameric arrangement
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGA
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Template Sequence  INFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEXVSLATEDERTLFFDFLPLDIK. . . . . . . . . . TRFHLYTVPG. . . . .
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   11........20.........30.........40.........50.........60..... ....70.....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  SKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
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Template Sequence  . . QVFYNASRKLILRGVDGIVFVADSAP. . . . . . . . . . . . . NRLRANAESXRNXREN. . . . . . . . . . . . . . . . . . . . . . .
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STTT
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   82.......90.........100....... ..110.........120...
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAEYGLTLDDVPIVIQVNKRDLPDALPVEXVRAVVDPEGKFPVLEAVAT.
Template Known Secondary structure  ..............................TTT

TTSS

TTSTT



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BGG.
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   124.....130.........140.........150.........160.........170..
 
   241........250.........260.........270.......
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Query Sequence  EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . EGKGVFETLKEVSRLV
Template Known Secondary structure  .....................GTBT
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   173......180........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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