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Job DescriptionP0ABU2
Confidence98.68%DateThu Jan 5 11:16:24 GMT 2012
Rank201Aligned Residues152
% Identity18%Templatec3oesA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:gtpase rhebl1; PDBTitle: crystal structure of the small gtpase rhebl1
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASK
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Template Sequence  RKVVILGYRCVGKTSLAHQFVE. GEFSEGYDPTVENTYSKIVTE. . . . . . . . . . . . . . . . . . . FHLHLVDTAGQDEYSIL
Template Known Secondary structure  STTSS.S


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   7..10.........20........ .30.........40......... 50.........60......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAEL
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Template Sequence  PYSFI. . . . . . . IGVHGYVLVYSVTS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGT.......TT

TT
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   71.... ....80.........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  AVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAVEA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . LHSFQVIESLYQKLHERVPVVLVGNKADLSPEREVQAVEGKKLAESWGATFMESSAR. . .
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TT
GGG

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   90.........100.........110.........120.........130.........140......
 
   243......250.........260.........270.......
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Query Sequence  DIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLL
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Template Sequence  . . . . . . . . . . . . . . . . . . . ENQLTQGIFTKVIQEI
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   152.......160.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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