Job Description P0ABU2 Confidence 99.39% Date Thu Jan 5 11:16:24 GMT 2012 Rank 76 Aligned Residues 152 % Identity 25% Template c3o47A_ PDB info PDB header:hydrolase, hydrolase activator Chain: A: PDB Molecule:adp-ribosylation factor gtpase-activating protein 1, adp- PDBTitle: crystal structure of arfgap1-arf1 fusion protein Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		M	G	F	K	C	G	I	V	G	L	P	N	V	G	K	S	T	L	F	N	A	L	.	T	K	A	G	I	E	A	A	N	F	P	F	C	T	I	E	P	N	T	G	V	V	P	M	P	D	P	R	L	D	Q	L	A	E	I	V	K	P	Q	R	T	L	P	T	T	M	E	F	V	D	I	A	G	L	V	K	G
Query Conservation																								.
Alig confidence																								.										.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		K	E	M	R	I	L	M	V	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	L	G	E	I	V	T	T	I	P	.	.	.	.	T	I	G	F	N	V	E	T	V	E	Y	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	F	T	V	W	D	V	G	R	P	L	.	.
Template Known Secondary structure			S								S	T	T	S	S								T		S	S								.	.	.	.		T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	.	.
Template Predicted Secondary structure																																		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190																		.	.	.	.	.	.	.	.	.	200	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	K	G	E	G	L	G	N	Q	F	L	T	N	I	R	E	T	E	A	I	G	H	V	V	R	C	F	E	N	D	N	I	I	H	V	S	G	K	V	N	P	A	D	D	I	E	V	I	N	T	E	L	A	L	A	D	L	D	T	C	E	R	A	I	H	R	V	Q	K	K	A	K	G	G	D	K	D	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	W	R	H	Y	F	Q	N	T	Q	G	L	I	F	V	V	D	S	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						T	T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		A	E	L	A	V	L	E	K	C	L	P	Q	L	E	N	A	G	M	L	R	A	L	D	L	S	A	E	E	K	A	A	I	R	Y	L	S	F	L	T	L	K	P	T	M	Y	I	A	N	V	N	E	D	G	F	E	N	N	P	Y	L	D	Q	V	R	E	I	A	.	.	.	.	.	A	K	E	G	S	V	V	V
Query Conservation																																																																					.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R	V	N	E	A	R	E	E	L	M	R	M	L	A	E	D	E	L	R	D	A	V	L	L	V	F	A	N	K	Q	D	L	P	N	A	M	N	.	.	A	A	E	I	T	D	K	L	G	L	H	S	L	R	H	R	N	W	Y	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S													T		G	G	G	T	T										T	T	S	T	T				.	.									T		T	T			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template SS confidence
																				227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	C	A	A	V	E	A	D	I	A	E	L	D	D	E	E	R	D	E	F	M	Q	E	L	G	L	E	E	P	G	L	N	R	V	I	R	A	G	Y	K	L	L	N
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	G	D	G	L	Y	E	G	L	D	W	L	S	N	Q	L	R
Template Known Secondary structure				B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	B	T													T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290																							.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions