Job Description P0ABU2 Confidence 98.06% Date Thu Jan 5 11:16:24 GMT 2012 Rank 261 Aligned Residues 166 % Identity 15% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	F	K	C	G	I	V	G	L	P	N	V	G	K	S	T	L	F	N	A	L	T	K	A	G	I	E	A	A	N	F	P	F	C	T	I	E	P	N	T	G	V	V	P	M	P	D	P	R	L	D	Q	L	A	E	I	V	K	P	Q	R	T	L	P	T	T	M	E	F	V	D	I	A	G	L	V	K	G	A
Query Conservation
Alig confidence																																	.	.	.	.																			.	.								.	.	.	.	.												.	.
Template Conservation																																	.	.	.	.																			.	.								.	.	.	.	.												.	.
Template Sequence		N	E	P	R	F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	E	E	L	C	P	.	.	.	.	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	.	.	Q	L	N	N	Q	H	K	.	.	.	.	.	F	N	I	L	I	L	Y	S	T	P	Q	.	.
Template Known Secondary structure											G	G	G	T	S	S	S	S								T			S	S			.	.	.	.					G	G	G			T	T	S							.	.		S	S	S	S			.	.	.	.	.							S					.	.
Template Predicted Secondary structure																																	.	.	.	.																			.	.								.	.	.	.	.												.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	G	E	G	L	G	N	Q	F	L	T	N	I	R	E	T	E	A	I	G	H	V	V	R	C	F	E	N	D	N	I	I	H	V	S	G	K	V	N	P	A	D	D	I	E	V	I	N	T	E	L	A	L	A	D	L	D	T	C	E	R	A	I	H	R	V	Q	K	K	A	K	G	G	D	K	D	A	K	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.									S									B	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.
Predicted Secondary structure																																																	.																									.	.	.	.
Query SS confidence																																																	.																									.	.	.	.
Query Sequence		E	L	A	V	L	E	K	C	L	P	Q	L	E	N	A	G	M	L	R	A	L	D	L	S	A	E	E	K	A	A	I	R	Y	L	S	F	L	T	L	K	P	T	M	Y	I	A	N	.	V	N	E	D	G	F	E	N	N	P	Y	L	D	Q	V	R	E	I	A	A	K	E	G	S	.	.	.	.	V	V	V	P
Query Conservation																																																	.																									.	.	.	.
Alig confidence		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.	.														.	.	.	.
Template Conservation		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		.	.	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	X	P	.	.	C	F	Y	L	A	H	E	L	H	L	N	L	L	N	H	P	W	L	V	Q	D
Template Known Secondary structure		.	.												S		T	T	S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	S	T	T	S		B			.	.								T	T	G	G	G	G		S
Template Predicted Secondary structure		.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
				303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.																		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	A	A	V	E	A	D	I	A	E	L	D	D	E	E	R	D	E	F	M	Q	E	L	G	L	E	E	P	G	L	N	R	V	I	R	A	G	Y	K	L	L	N
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T									T	T	T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		362	.	.	.																							.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions