Job Description P0ABU2 Confidence 99.84% Date Thu Jan 5 11:16:24 GMT 2012 Rank 19 Aligned Residues 156 % Identity 24% Template c2qthA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of a gtp-binding protein from the2 hyperthermophilic archaeon sulfolobus solfataricus in3 complex with gdp Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		K	C	G	I	V	G	L	P	N	V	G	K	S	T	L	F	N	A	L	T	K	A	G	I	E	A	A	N	F	P	F	C	T	I	E	P	N	T	G	V	V	P	M	P	D	P	R	L	D	Q	L	A	E	I	V	K	P	Q	R	T	L	P	T	T	M	E	F	V	D	I	A	G	L	V	K	G	.	A	S	K
Query Conservation																																																																														.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	G	I	V	G	Y	T	N	S	G	K	T	S	L	F	N	S	L	T	G	.	.	.	.	.	.	.	.	.	.	.	L	M	S	P	K	R	Y	A	I	P	I	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	I	M	L	V	D	T	V	G	F	I	R	G	I	P	P	Q
Template Known Secondary structure								B	T	T	S	S										T	.	.	.	.	.	.	.	.	.	.	.				S								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											B		S	S			G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.												.	.	.	.	.	.	.	.	210	.	.	.	.																		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	G	L	G	N	Q	F	L	T	N	I	R	E	T	E	A	I	G	H	V	V	R	C	F	E	N	D	N	I	I	H	V	S	G	K	V	N	P	A	D	D	I	E	V	I	N	T	E	L	A	L	A	D	L	D	T	C	E	R	A	I	H	R	V	Q	K	K	A	K	G	G	D	K	D	A	K	A	E	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	D	A	F	F	V	T	L	S	E	A	K	Y	S	D	A	L	I	L	V	I	D	S	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	N	L	L	I	E	T	L
Template Known Secondary structure		G										G	G	G	G	S	S								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																																														270	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		A	V	L	E	K	C	L	P	Q	L	E	N	A	G	M	L	R	A	L	D	L	S	A	E	E	K	A	A	I	R	Y	L	S	F	L	T	L	K	P	T	M	Y	I	A	N	V	N	E	D	G	F	E	N	N	.	.	.	.	P	Y	L	D	Q	V	R	E	I	A	A	K	E	G	S	V	V	V	P	V	C	A
Query Conservation																																																								.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	S	F	E	I	L	R	E	I	G	V	S	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	L	V	T	L	N	K	I	D	K	I	N	G	D	L	Y	K	K	L	D	L	V	E	K	L	S	K	E	L	Y	S	P	I	F	D	V	I	P	I	S	A
Template Known Secondary structure												T			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G			S																		S									B	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.																								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	A	D	I	A	E	L	D	D	E	E	R	D	E	F	M	Q	E	L	G	L	E	E	P	G	L	N	R	V	I	R	A	G	Y	K	L	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	T	N	L	E	L	L	R	D	K	I	Y	Q	L	A
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		336																							.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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