 |
Job Description | P0AD37 | Confidence | 23.17% | Date | Thu Jan 5 11:19:54 GMT 2012 |
Rank | 135 | Aligned Residues | 32 |
% Identity | 22% | Template | d2fxaa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.40 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | P | D | E | L | A | R | L | T | G | Y | S | R | Q | T | I | N | . |
. |
. |
K | W | V | R | K | E | G | W | T | T | S | P | K | P |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|   |
|   |
|   |
|   |
|   | . | . | . |   |   |
|   |   |
|
|
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|   |   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |
|   |
Template Sequence |   |
A | S | I | S | E | I | A | K | F | G | V | X | H | V | S | T | A | F | N | F | S | K | K | L | E | E | R | G | Y | L | R | F | S | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|