Job Description P0AD37 Confidence 82.65% Date Thu Jan 5 11:19:54 GMT 2012 Rank 24 Aligned Residues 98 % Identity 11% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		M	T	P	D	E	L	A	R	L	T	G	Y	S	R	Q	T	I	N	.	.	.	K	W	V	R	K	E	G	W	T	T	S	P	K	P	G	V	Q	G	G	K	A	R	L	V	H	V	N	E	Q	V	R	E	Y	I	R	N	A	E	R	P	E	G	Q	G	E	A	P	A	L	S	G	D	A	P	L	E	V	L	L
Query Conservation																				.	.	.
Alig confidence																				.	.	.															.	.	.																															.	.	.	.	.	.	.
Template Conservation																																					.	.	.																															.	.	.	.	.	.	.
Template Sequence		L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	G	F	V	R	K	V	W	I	.	.	.	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K	H	D	L	I	A	K	.	.	.	.	.	.	.	T	Y	E	D	L
Template Known Secondary structure												T																T	T	S							.	.	.	T	T		S	S																										.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	T	L	A	K	E	M	T	P	V	E	Q	K	Q	F	T	S	L	L	L	R	.	E	G	I	I	G	L	L	Q	R	L
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		K	K	L	E	E	K	C	N	E	E	E	K	E	F	I	K	Q	K	I	K	G	I	E	R	X	K	K	I	S	E	K	I
Template Known Secondary structure								S		T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions