Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD37
Confidence89.78%DateThu Jan 5 11:19:54 GMT 2012
Rank12Aligned Residues89
% Identity10%Templatec2qwwB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10........ .20.........30.........40.........50.........60.........70.......
Predicted Secondary structure 







...



















Query SS confidence 

















. . .


























































Query Sequence  MTPDELARLTGYSRQTIN. . . KWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLL
Query Conservation   

 


 
 
 
 
 
 ...  
  


  
 
 
  


  

 
 


 
    
   
    
             
Alig confidence 

















...
















....
















............








Template Conservation   
   

  
 
   


  
  
  

 
 
     
.... 

 

  
        ............         
Template Sequence  ISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTXD. . . . LTLKLSKKGEDLSKRST. . . . . . . . . . . . ANAFXYKAX
Template Known Secondary structure  T

TTSS




....

............S
Template Predicted Secondary structure 







....





............
Template SS confidence 















































































   55....60.........70.........80.........90.. .......100......... 110........
 
   78.80.........90.........100.......
Predicted Secondary structure 


Query SS confidence 





























Query Sequence  VTLAKEMTPVEQKQFTSLLLREGIIGLLQR
Query Conservation 
     

  

 
    
 



  

 
Alig confidence 




















..






Template Conservation        

 

   
  

 
..
   
 
Template Sequence  XKVFENLTENEIEELIRLNKK. . VETLLKK
Template Known Secondary structure  TS
..T
Template Predicted Secondary structure 



..

Template SS confidence 





























   124.....130.........140.... .....150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions