Return to main results Retrieve Phyre Job Id

Job DescriptionP77148
Confidence98.70%DateThu Jan 5 12:25:39 GMT 2012
Rank208Aligned Residues151
% Identity16%Templated1neka2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70...
Predicted Secondary structure 



































..........
Query SS confidence 





































































. . . . . . . . . .
Query Sequence  IAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWL. . . . . . . . . .
Query Conservation 






 


  
  
        
 
 
     
 
  
         
 
               
 ..........
Alig confidence 



















..


















.....























..........
Template Conservation 










 

  

  ..
  
 


     

 
  .....                                  
Template Sequence  AVVIGAGGAGMRAALQISQS. . GQTCALLSKVFPTRSHTVS. . . . . AQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQ
Template Known Secondary structure 


ST..T



SS
GGGSGGGG.....

S




SSS


TS
S
Template Predicted Secondary structure 



..








.....

















Template SS confidence 















































































   10.........20......... 30.........40........ .50.........60.........70.........80..
 
   74.....80.........90.........100... ......110.........120......
Predicted Secondary structure  .........
















..................


Query SS confidence  . . . . . . . . .





























. . . . . . . . . . . . . . . . . .






















Query Sequence  . . . . . . . . . QKQEDSHLQRYGVKKETLHDRQFLPRILLG. . . . . . . . . . . . . . . . . . EYFRDQFLRLVDQARQQKFAVAV
Query Conservation  .........                      
 

   
.................. 

                   
Alig confidence  .........





























..................

















..


Template Conservation                                                                             ..   
Template Sequence  DAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNH. . TTI
Template Known Secondary structure  TT



B
S
BTTB


SSB

TTSSS

TT
TT..
Template Predicted Secondary structure 






































..
Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150....... ..160
 
   127..130.........140 .........150. ........160...
Predicted Secondary structure 




....




..


Query SS confidence 













. . . .










. .











Query Sequence  YESCQVTDLQITNA. . . . GVMLATNQDLP. . SETFDLAVIATG
Query Conservation       
  
     ....
   
    
 ..   

 





Alig confidence 













....










..











Template Conservation                             
      
  



 
Template Sequence  FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATG
Template Known Secondary structure 
S
TTS
TTT

S



Template Predicted Secondary structure 














Template SS confidence 










































   161........170.........180.........190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions