Job Description P77148 Confidence 99.02% Date Thu Jan 5 12:25:39 GMT 2012 Rank 127 Aligned Residues 178 % Identity 15% Template c3d8xB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of saccharomyces cerevisiae nadph dependent2 thioredoxin reductase 1 Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	A	I	V	G	A	G	P	T	G	I	Y	T	L	F	S	L	L	Q	Q	Q	T	P	L	S	I	S	I	F	E	Q	A	D	E	A	G	V	G	M	P	Y	S	D	E	E	N	S	K	M	M	L	A	N	I	A	S	I	E	I	P	P	I	Y	C	T	Y	L	E	W	L	Q	K	Q	E	D	S	H	L
Query Conservation
Alig confidence																								.	.																		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	V	T	I	I	G	S	G	P	A	A	H	T	A	A	I	Y	L	A	R	A	.	.	E	I	K	P	I	L	Y	E	G	M	M	A	N	G	I	A	A	.	.	.	.	.	.	.	G	G	Q	L	T	T	T	T	E	I	E	N	F	P	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S													T	.	.	T									S	S	G	G	G			T	.	.	.	.	.	.	.	T		G	G	G	G		S					S	T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	Y	G	V	K	K	E	T	L	H	D	R	Q	F	L	P	R	I	L	L	G	E	Y	F	R	D	Q	F	L	R	L	V	D	Q	A	R	Q	Q	K	F	A	V	A	V	Y	E	S	C	Q	V	T	D	L	Q	I	T	N	A	G	V	M	L	A	T	N	Q	D	L	P	S	E	T	F	D	L	A	V	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	L	T	G	S	E	L	M	D	R	M	R	E	Q	S	T	K	F	.	.	.	.	.	.	.	.	G	T	E	I	I	T	E	T	V	S	K	V	D	L	S	S	K	P	F	K	L	W	T	E	F	N	E	D	A	E	P	V	T	T	D	A	I	I	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T																		T	.	.	.	.	.	.	.	.	T														S	S	S	S						T	T		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
															60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		T	G	H	V	W	P	D	.	.	.	.	.	.	E	E	E	A	T	R	T	Y	F	P	S	P	W	S	G	L	M	E	A	K	V	D	A	C	N	V	G	I	M	G	T	S	L	S	G	L	D	A	A	M	A	V	A	I	Q	H	G	S	F	I	E	D	D	K	Q	H
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	A	S	A	K	R	M	H	L	P	G	E	E	T	Y	W	Q	K	G	I	S	A	C	A	V	C	D	G	A	V	P	I	F	R	N	K	P	L	A	V	I	G	G	G	D	S	A	C	E	E	A	Q	F	L	T	K	Y	G	S	K	V	F	M	L	V	R	K	D
Template Known Secondary structure												T	T					B	T	T	T			S						T	T	S	G	G	G	T	T	S							S	S											T	T	T	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions