Job Description P77148 Confidence 99.38% Date Thu Jan 5 12:25:39 GMT 2012 Rank 45 Aligned Residues 149 % Identity 15% Template c2zxiC_ PDB info PDB header:fad-binding protein Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: structure of aquifex aeolicus gida in the form ii crystal Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	V	G	A	G	P	T	G	I	Y	T	L	F	S	L	L	Q	Q	Q	T	P	L	S	I	S	I	F	E	Q	A	D	E	A	G	V	G	M	P	Y	S	D	E	E	N	S	K	M	M	L	A	N	I	A	S	I	E	I	P	P	I	Y	C	T	Y	L	E	W	L	Q	K	Q	E	D	S	H	L	Q	R
Query Conservation
Alig confidence																						.	.																							.	.
Template Conservation																						.	.																							.	.
Template Sequence		V	V	V	I	G	G	G	H	A	G	I	E	A	A	L	A	A	A	R	M	.	.	G	A	K	T	A	M	F	V	L	N	A	D	T	I	G	Q	M	S	C	N	P	A	.	.	I	G	G	I	A	K	G	I	V	V	R	E	I	D	A	L	G	G	E	M	G	K	A	I	D	Q	T	G	I	Q	F	K	M	L
Template Known Secondary structure							S	S													T	.	.	T								S		G	G	G	T	T				S		S		.	.				T	T												T		S
Template Predicted Secondary structure																						.	.																							.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Y	G	V	K	K	E	T	L	H	D	R	Q	.	F	L	P	R	I	L	L	G	E	Y	F	R	D	Q	F	L	R	L	V	D	Q	A	R	Q	Q	K	F	A	V	A	V	Y	E	S	C	Q	V	T	D	L	Q	I	T	N	A	G	V	M	L	A	T	N	Q	D	L	P	S	E	T	F	D	L	A	V	I	A	T
Query Conservation														.
Alig confidence														.																			.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	R	K	G	K	A	V	Q	S	P	R	A	Q	A	D	K	K	R	Y	R	E	Y	M	K	K	V	C	E	N	Q	.	.	.	.	.	.	.	.	.	E	N	L	Y	I	K	Q	E	E	V	V	D	I	I	V	K	N	N	Q	V	V	G	V	R	T	N	L	G	V	E	Y	K	T	K	A	V	V	V	T	T
Template Known Secondary structure		S	T	T	S		G	G	G																							S	.	.	.	.	.	.	.	.	.	T	T						S								S	S	S	B							T	T	S						S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	F
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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