Job Description P77148 Confidence 98.78% Date Thu Jan 5 12:25:39 GMT 2012 Rank 187 Aligned Residues 156 % Identity 15% Template c1yvvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:amine oxidase, flavin-containing; PDBTitle: x-ray structurure of p. syringae q888a4 oxidoreductase at2 resolution 2.5a. northeast structural genomics consortium3 target psr10. Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	I	V	G	A	G	P	T	G	I	Y	T	L	F	S	L	L	Q	Q	Q	T	P	L	S	I	S	I	F	E	Q	A	D	E	A	G	V	G	M	P	Y	S	D	E	E	N	S	K	M	M	L	A	N	I	A	S	I	E	I	P	P	I	Y	C	T	Y	L	E	W	L	Q	K	Q	E	D	S	H	L	Q
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		P	I	A	I	I	G	T	G	I	A	G	L	S	A	A	Q	A	L	T	A	A	.	.	G	H	Q	V	H	L	F	D	K	S	R	G	S	G	G	R	X	S	S	K	R	S	D	A	G	A	L	D	X	G	A	Q	Y	F	T	A	R	D	R	R	F	A	T	A	V	K	Q	W	Q	A	Q	G	H	V	A	E	W
Template Known Secondary structure									S													T	.	.	T								S	S	S	S	S		G	G	G						T	T	S					S				B				S														T	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	G	V	K	K	E	T	L	H	D	R	Q	F	L	P	R	I	L	L	G	E	Y	F	R	D	Q	F	L	R	L	V	D	Q	A	R	Q	Q	K	F	A	V	A	V	Y	E	S	C	Q	V	T	D	L	Q	I	T	N	A	G	V	M	L	A	T	N	Q	D	L	P	S	E	T	F	D	L	A	V	I	A	T
Query Conservation
Alig confidence																																								.	.	.
Template Conservation																																								.	.	.
Template Sequence		T	P	L	L	Y	N	F	H	A	G	R	L	S	P	S	P	D	E	Q	V	R	W	V	G	K	P	G	X	S	A	I	T	R	A	X	R	G	D	.	.	.	X	P	V	S	F	S	C	R	I	T	E	V	F	R	G	E	E	H	W	N	L	L	D	A	E	G	Q	N	H	G	P	F	S	H	V	I	I	A	T
Template Known Secondary structure									S	S	S							S	S	S						S	S	S	T	T								T	T	.	.	.						S										S	S							T	T	S							S						S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions