Job Description P77148 Confidence 98.85% Date Thu Jan 5 12:25:39 GMT 2012 Rank 162 Aligned Residues 174 % Identity 16% Template c1vdcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dependent thioredoxin reductase; PDBTitle: structure of nadph dependent thioredoxin reductase Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	A	I	V	G	A	G	P	T	G	I	Y	T	L	F	S	L	L	Q	Q	Q	T	P	L	S	I	S	I	F	E	Q	A	D	E	A	G	V	G	M	P	Y	S	D	E	E	N	S	K	M	M	L	A	N	I	A	S	I	E	I	P	P	I	Y	C	T	Y	L	E	W	L	Q	K	Q	E	D	S	H	L
Query Conservation
Alig confidence																								.	.																		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	L	C	I	V	G	S	G	P	A	A	H	T	A	A	I	Y	A	A	R	A	.	.	E	L	K	P	L	L	F	E	G	W	M	A	N	D	I	A	P	.	.	.	.	.	.	.	G	G	Q	L	T	T	T	T	D	V	E	N	F	P	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S													T	.	.	T									S	S	B	T	T	B		T	.	.	.	.	.	.	.	T		G	G	G	G		S					S	T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	Y	G	V	K	K	E	T	L	H	D	R	Q	F	L	P	R	I	L	L	G	E	Y	F	R	D	Q	F	L	R	L	V	D	Q	A	R	Q	Q	K	F	A	V	A	V	Y	E	S	C	Q	V	T	D	L	Q	I	T	N	A	G	V	M	L	A	T	N	Q	D	L	P	S	E	T	F	D	L	A	V	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	I	L	G	V	E	L	T	D	K	F	R	K	Q	S	E	R	F	.	.	.	.	.	.	.	.	.	.	G	T	T	I	F	T	E	T	V	T	K	V	D	F	S	S	K	P	F	.	.	K	L	F	T	D	S	K	A	I	L	A	D	A	V	I	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T																		T	.	.	.	.	.	.	.	.	.	.	T														S	S	S	S		.	.					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
															57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	H	V	W	P	D	E	E	E	A	T	R	T	Y	F	P	S	P	W	S	G	.	.	.	.	.	.	.	.	.	.	L	M	E	A	K	V	D	A	C	N	V	G	I	M	G	T	S	L	S	G	L	D	A	A	M	A	V	A	I	Q	H	G	S	F	I	E	D	D	K	Q	H
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	A	V	A	K	R	L	S	F	V	G	S	G	E	V	L	G	G	F	W	N	R	G	I	S	A	C	A	V	C	D	G	A	A	P	I	F	R	N	K	P	L	A	V	I	G	G	G	D	S	A	M	E	E	A	N	F	L	T	K	Y	G	S	K	V	Y	I	I	H	R	R	D
Template Known Secondary structure												B	T		S	S	S	S	S			B	T	T	T			S						T	T	S	G	G	G	T	T	S								S											T	T	T	S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions