|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
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. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
 |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
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|  |  |  |  |  |  |  |  |
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|  | . | . |
Query SS confidence |   |
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| . |
. |
Query Sequence |   |
I | A | I | V | G | A | G | P | T | G | I | Y | T | L | F | S | L | L | Q | . |
. |
. |
Q | Q | T | P | L | S | I | S | I | F | E | Q | A | D | E | A | G | V | G | M | P | Y | S | D | E | E | N | S | K | M | M | L | A | N | I | A | S | I | E | I | P | P | I | Y | C | T | Y | L | E | W | L | Q | K | Q | E | D | . |
. |
Query Conservation |   |
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|   |   | . | . | . |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |
Alig confidence |   |
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| . | . | . |
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| . | . |
Template Conservation |   |
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|   |   |   |   |   |   |
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|   |
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|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|   |   |   |
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|   |
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|   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
V | L | I | V | G | A | G | P | A | G | L | M | A | A | R | V | L | S | E | Y | V | R | Q | K | P | D | L | K | V | R | I | I | D | K | R | S | T | K | . |
. |
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V | Y | N | G | Q | A | D | G | L | Q | C | R | T | L | E | S | L | K | N | L | G | L | A | D | K | I | L | S | E | A | N | D | M | S |
Template Known Secondary structure |   |
 |  |  |  |
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| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |
| S | S | S | S |
| . | . | . | . | . | . | . | . |
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| S |
| S |
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|  |  |
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  | T | T |
| B |
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|
Template Predicted Secondary structure |   |
 |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . |
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|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
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. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
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79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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| . | . |
Query SS confidence |   |
. |
. |
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. |
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| . |
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Query Sequence |   |
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S | H | L | Q | R | Y | G | V | K | K | E | T | L | H | D | R | Q | F | L | P | R | I | L | L | G | E | Y | F | R | D | Q | F | L | R | L | V | D | Q | A | R | Q | Q | K | F | A | V | A | V | Y | E | S | C | Q | V | T | D | L | Q | I | T | N | A | G | . |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
| . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . |
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| . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
T | I | A | L | Y | N | P | D | E | N | G | H | I | R | R | T | D | R | I | P | D | T | L | P | G | I | S | R | Y | H | Q | V | V | L | H | Q | G | R | I | E | R | R | I | L | D | S | I | A | E | I | . |
. |
. |
. |
. |
. |
S | D | T | R | I | K | V | E | R | P | L | I | P | E | K | M | E | I | D | S | S | K | A | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | S | S |
| T | T | S |
| S | S |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  | T | T | S | S |
|  |  |
| S |  |  |  |  |  |  |  |  |
| G | G | G | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
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|
|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |
Template SS confidence |   |
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
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. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
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142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
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V | M | L | A | T | N | Q | D | L | P | S | E | T | F | D | L | A | V | I | A | T | G |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |
|   |   |   |   |
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|   |
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Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
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Template Sequence |   |
D | P | E | A | Y | P | V | T | M | T | L | R | Y | M | S | E | D | E | S | T | P | L | Q | F | G | H | K | T | E | N | G | L | F | R | S | N | L | Q | T | Q | E | E | E | D | A | N | Y | R | L | P | E | G | K | E | A | G | E | I | E | T | V | H | C | K | Y | V | I | G | C | D | G |
Template Known Secondary structure |   |
| T | T |
|
|
|  |  |  |  |  |  |  |
|
| G | G | G | S |
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|
| T | T |
|
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| S | S | S |
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|  |  |  |  |  |  |  |  |  | T | S |
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| S | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |