Return to main results Retrieve Phyre Job Id

Job DescriptionP77148
Confidence99.77%DateThu Jan 5 12:25:39 GMT 2012
Rank9Aligned Residues309
% Identity16%Templatec1lqtB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:fpra; PDBTitle: a covalent modification of nadp+ revealed by the atomic resolution2 structure of fpra, a mycobacterium tuberculosis oxidoreductase
Resolution1.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20... ......30.........40.........50.........60.........70.......
Predicted Secondary structure 



.....


































Query SS confidence 




















. . . . .





















































Query Sequence  KIAIVGAGPTGIYTLFSLLQQ. . . . . QTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQE
Query Conservation 







 


  
  
   .....     
 
 
     
 
  
         
 
               
     
Alig confidence 




















.....






















...............................
Template Conservation   
 








 

  
          
  
 
 
     

    
 ...............................
Template Sequence  YIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

SSTT

SSSS
STTS...............................
Template Predicted Secondary structure 



















...............................
Template SS confidence 















































































   5....10.........20.........30.........40.........50...
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  DSHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDL
Query Conservation                    
 

   
 

                   
     
  
     
   
    
    

 
Alig confidence  ...............




















.........









.........










.



Template Conservation  ............... 
               
   ......... 
       
.........           .    
Template Sequence  . . . . . . . . . . . . . . . APDHPKIKSISKQFEKTAEDP. . . . . . . . . RFRFFGNVVV. . . . . . . . . GEHVQPGELSE. RYDA
Template Known Secondary structure  ...............
TT
TTGGGGTST.........TS

B.........TTTB
.SS
Template Predicted Secondary structure  ...............






.........


..........

Template SS confidence 















































































   54.....60.........70.... .....80.... .....90..... ....
 
   158.160.........170 .........180.........190.........200.........210.........220...
Predicted Secondary structure 









..............


























Query SS confidence 












. . . . . . . . . . . . . .




















































Query Sequence  AVIATGHVWPDEE. . . . . . . . . . . . . . EATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQ
Query Conservation 






      ..............         
 
           
 


 


 

 
  
    
        
Alig confidence 












..............




















































Template Conservation 

 
 
      
 
                                   
 


 
 

 
 
  
             
Template Sequence  VIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIA
Template Known Secondary structure 









TTTTSTTTT
GGGTT





SS
SSS
TTS


Template Predicted Secondary structure 
















































Template SS confidence 















































































   100.........110.........120.........130.........140.........150.........160.........170.........
 
   224.....230.........240.........250.........260.........270.........280.........290.........300...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  HVVFHRDNASEKLNITLLSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRI
Query Conservation       
   

   
   

 
  
                                      

  
            
Alig confidence 







































































........
Template Conservation                
 
  
           
                                        ........
Template Sequence  DHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKV. . . . . . . .
Template Known Secondary structure  TT




SS
GGG



GGGG
TT

GGGGTT


........
Template Predicted Secondary structure 
























........
Template SS confidence 















































































   180.........190.........200.........210.........220.........230.........240.........250.
 
   304.....310.........320.........330.........340.........350.........360.........370.........380...
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  ALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVF
Query Conservation                                
  
           
   
  

         
       
        
Alig confidence  .......................................................................








Template Conservation  .......................................................................         
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LRGYADREP
Template Known Secondary structure  .......................................................................TS

Template Predicted Secondary structure  .......................................................................



Template SS confidence 















































































   252.......260
 
   384.....390.........400.........410.........420.........430.. .......440.........450.....
Predicted Secondary structure 























..












Query SS confidence 
















































. .






















Query Sequence  IDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDN. . SYSFDVFIDARGQRPLKVKDIPF
Query Conservation        

      



  

 
 
        
       
      ..  
 
 

 


           
Alig confidence 
















































..






















Template Conservation                   
     
  
            
       
    
  
 

 


        
  
Template Sequence  RPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPF
Template Known Secondary structure 
TTS
S
SSS


SSSS
S
S




TTS

Template Predicted Secondary structure 



































Template SS confidence 









































































   261........270.........280.........290.........300.........310.........320.........330....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions