Job Description P77148 Confidence 99.00% Date Thu Jan 5 12:25:39 GMT 2012 Rank 133 Aligned Residues 158 % Identity 17% Template c1kf6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase flavoprotein; PDBTitle: e. coli quinol-fumarate reductase with bound inhibitor hqno Resolution 2.70 Å

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		1	.	.	.					.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query Sequence		M	K	K	I	.	.	.	.	A	I	V	G	A	G	P	T	G	I	Y	T	L	F	S	L	L	Q	Q	Q	T	P	L	S	I	S	I	F	E	Q	A	D	E	A	G	V	G	M	P	Y	S	.	.	.	.	.	.	.	.	.	D	E	E	N	S	K	M	M	L	A	N	I	A	S	I	E	I	P	P	I	Y	C
Query Conservation						.	.	.	.																																										.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	T	F	Q	A	D	L	A	I	V	G	A	G	G	A	G	L	R	A	A	I	A	A	A	Q	A	N	P	N	A	K	I	A	L	I	S	K	V	Y	P	M	R	S	H	T	V	A	A	E	G	G	S	A	A	V	A	Q	D	H	D	S	F	E	Y	H	F	H	D	T	V	A	G	G	D	W	L	C	E	Q
Template Known Secondary structure								S							S															T	T								S	S		G	G	G	S	G	G	G	G			S							S	T	T														T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Y	L	E	W	L	Q	K	Q	E	D	S	H	L	Q	R	Y	G	V	K	K	E	T	L	H	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	L	P	R	I	L	L	G	E	Y	F	R	D	Q	F	L	R	L	V	D	Q	A	R	Q	Q	K	F	A	V	A	V	Y	E	S
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		D	V	V	D	Y	F	V	H	H	C	P	T	E	M	T	Q	L	E	L	W	G	C	P	W	S	R	R	P	D	G	S	V	N	V	R	R	F	G	G	M	K	I	E	R	T	W	F	A	A	D	K	T	G	F	H	M	L	H	T	L	F	Q	T	S	.	.	.	.	.	L	Q	F	P	Q	I	Q	R	F	D	E
Template Known Secondary structure																					T	T					B		T	T	S	S	B			B			T	T		S	S						S	T	T															.	.	.	.	.	T	T		T	T						T
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		C	Q	V	T	D	L	Q	I	T	N	A	G	V	M	L	A	T	N	Q	D	L	.	.	.	.	.	P	S	E	T	F	D	L	A	V	I	A	T	G
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		H	F	V	L	D	I	L	V	D	D	G	H	V	R	G	L	V	A	M	N	M	M	E	G	T	L	V	Q	I	R	A	N	A	V	V	M	A	T	G
Template Known Secondary structure											T	T										T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions