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4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
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. | . | . | . | . | 80 |
Predicted Secondary structure |   |
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| . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
K | A | W | Q | N | A | H | A | M | Y | E | N | D | A | C | A | K | A | L | G | I | D | I | I | S | M | D | E | G | F | A | V | V | T | M | T | V | T | A | Q | M | L | N | G | H | Q | S | C | H | G | G | Q | L | F | S | L | A | D | T | A | F | A | Y | A | C | N | S | Q | G | L | A | . |
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A | V | A | S | A | C |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   | . | . | . |   |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
G | Y | A | Q | K | V | R | D | S | F | A | R | Q | P | V | M | A | T | L | G | A | R | I | D | T | L | L | P | G | R | V | E | L | C | M | P | Y | D | R | A | L | T | Q | Q | H | G | F | L | H | A | G | I | V | S | T | V | L | D | S | A | C | G | Y | A | A | F | S | L | M | E | E | E | A | A | V | L | T | V | E | F |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
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| G | G | G | B |
| T | T | S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
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  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
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. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  | . | . | . |  |
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Query SS confidence |   |
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Query Sequence |   |
T | I | D | F | L | R | P | G | F | A | G | D | T | L | T | A | T | A | Q | V | R | H | Q | G | K | Q | T | G | V | Y | D | I | E | I | V | . |
. |
. |
N | Q | Q | Q | K | T | V | A | L | F | R | G | K | S | H | R | I | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
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|   |   |   |   |   |   |   |   |
|   | . | . | . |
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|   |   |   |   |   |   |
Alig confidence |   |
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Template Conservation |   |
  |   |   |   |
|   |
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|   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |
|   |   |   |   |
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|   |
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|   |
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Template Sequence |   |
K | V | N | F | L | N | P | A | E | . |
G | E | R | F | A | F | R | A | E | V | V | K | P | G | R | T | L | T | V | A | T | A | T | A | Y | A | F | R | D | G | E | E | R | A | I | A | T | M | T | A | T | L | M | A | L | I | G |
Template Known Secondary structure |   |
 |  |  |  |
| S |
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| . | S | S |  |  |  |  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
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| . |
|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
86 | . | . | . | 90 | . | . | . | . | |
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
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