Job Description P76084 Confidence 99.91% Date Thu Jan 5 12:18:35 GMT 2012 Rank 27 Aligned Residues 132 % Identity 14% Template c3bnvD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cj0977; PDBTitle: crystal structure of cj0977, a sigma28-regulated virulence protein2 from campylobacter jejuni. Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																													.
Query SS confidence																.																													.
Query Sequence		S	H	K	A	W	Q	N	A	H	A	M	Y	E	N	.	D	A	C	A	K	A	L	G	I	D	I	I	S	M	D	E	G	F	A	V	V	T	M	T	V	T	A	Q	.	M	L	N	G	H	Q	S	C	H	G	G	Q	L	F	S	L	A	D	T	A	F	A	Y	A	C	N	S	Q	G	L	A	A	V	A	S	A
Query Conservation																.																													.
Alig confidence																.																													.																										.	.
Template Conservation																																																																							.	.
Template Sequence		S	A	E	D	I	S	R	V	R	A	E	L	L	T	C	P	E	L	N	T	S	L	A	G	T	I	I	E	I	D	K	N	Y	A	K	S	I	L	I	T	T	S	E	X	V	A	D	D	Q	G	L	I	F	D	A	F	I	F	A	A	A	N	Y	V	A	Q	A	S	I	.	.	N	K	E	F	S	V	I	I	G
Template Known Secondary structure															S		T	T														T	T										G	G	G	B	S	S	T	T		B	B		T																.	.			S	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		C	T	I	D	F	L	R	P	G	F	A	G	D	T	L	T	A	T	A	Q	V	R	H	Q	G	.	K	Q	T	G	V	Y	D	I	E	I	V	N	Q	Q	Q	K	T	V	A	L	F	R	G	K	S	H	R	I	G	G	T	I
Query Conservation																											.
Alig confidence																											.												.
Template Conservation																																							.
Template Sequence		S	K	C	F	F	Y	A	P	L	K	L	G	D	V	L	E	L	E	A	H	A	L	F	D	E	T	S	K	K	R	D	V	K	V	V	G	H	.	V	K	E	I	K	X	F	E	G	T	I	Q	V	V	S	T	D	E	H	I
Template Known Secondary structure								S			B	T	T													S	S		S										.		T	T														S	S		T
Template Predicted Secondary structure																																							.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions