Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence97.91%DateThu Jan 5 12:04:31 GMT 2012
Rank220Aligned Residues140
% Identity16%Templated1sgwa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.. .......40.........50.........60.........70.......
Predicted Secondary structure 














....









Query SS confidence 






























. . . .












































Query Sequence  STTNHDHHIYVLMGVSGSGKSAVASEVAHQL. . . . HAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQ
Query Conservation          

 
 
  







  

  
....    
  
                                     
Alig confidence 






























....











































.
Template Conservation 
  
  

   
 
 








  
 
      
 
   
         
    
        
    
        .
Template Sequence  TMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYG.
Template Known Secondary structure  TT



TTSSTTSS

STTGGGGGGG
SS



TTSBTT.
Template Predicted Secondary structure 









































.
Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........
 
   78.80.........90.........100.........110.........120... ......130.........140.........150..
Predicted Secondary structure 














.....






Query SS confidence 













































. . . . .




























Query Sequence  RTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKA. . . . . RKGHFFKTQMLVTQFETLQEPGADETDVL
Query Conservation        

                      
 
         
   .....
                            
Alig confidence  ................................













.....




























Template Conservation  ................................       
   
       
      

 
   

 

 

   
 

Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VKVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTLLVNAEIY
Template Known Secondary structure  ................................



TT


TTSBGGGS
TTS

S
Template Predicted Secondary structure  ................................
























Template SS confidence 















































































   100.........110.........120.........130.........140.......
 
   153... ...160.........170....
Predicted Secondary structure 

......



Query SS confidence 



. . . . . .

















Query Sequence  VVDI. . . . . . DQPLEGVVASTIEVIKKG
Query Conservation   

 ......  
 
 
   
   
  
Alig confidence 



......

















Template Conservation 





  

      
   
       
Template Sequence  VLDDPVVAIDEDSKHKVLKSILEILKEK
Template Known Secondary structure  STTTTS
TTT
Template Predicted Secondary structure 








Template SS confidence 



























   148.150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions