Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence99.50%DateThu Jan 5 12:04:31 GMT 2012
Rank101Aligned Residues160
% Identity19%Templated1lvga_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........
Predicted Secondary structure 

















...................
Query SS confidence 




























































. . . . . . . . . . . . . . . . . . .
Query Sequence  HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQAL. . . . . . . . . . . . . . . . . . .
Query Conservation   

 
 
  







  

  
    
  
                             ...................
Alig confidence 




























































...................
Template Conservation 
 


 

 



 

   
              


  
  
  
  
 
     
                   

  
Template Sequence  RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTS
Template Known Secondary structure 



TTSSTTT



S


TT

BTTTB

T
TT
Template Predicted Secondary structure 










































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   70.........80.........90.........100.........110.........120.........130.........140... ....
Predicted Secondary structure 


















..
Query SS confidence 









































































. .



Query Sequence  NDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQE. . PGAD
Query Conservation                

                      
 
         
   
                   ..    
Alig confidence 

















..





































..













..



Template Conservation                
   ..       
         
 
   
   
  

  
   ..        
           
Template Sequence  KEAVRAVQAMNRICVLDV. . DLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTE. . TEESLAKRLAAARTDMESSK
Template Known Secondary structure  TT

..
TTSS



S
T
S..
TTGGG
Template Predicted Secondary structure 



..










..


Template SS confidence 















































































   85....90.........100.. .......110.........120.........130.........140 .........150.........160
 
   148.150. ........160.........170...
Predicted Secondary structure 


..




Query SS confidence 



. .





















Query Sequence  ETDV. . LVVDIDQPLEGVVASTIEVIKK
Query Conservation      ..  

   
 
 
   
   
  
Alig confidence 



..





.














Template Conservation      

 

 
 . 

     
   
  
Template Sequence  EPGLFDLVIIND. DLDKAYATLKQALSE
Template Known Secondary structure  STTT
S
S.ST
Template Predicted Secondary structure 







.
Template SS confidence 



























   161........170.. .......180.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions