Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence99.64%DateThu Jan 5 12:04:31 GMT 2012
Rank86Aligned Residues164
% Identity17%Templated1gkya_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70
Predicted Secondary structure 

















..................
Query SS confidence 





























































. . . . . . . . . . . . . . . . . .
Query Sequence  HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALN. . . . . . . . . . . . . . . . . .
Query Conservation   

 
 
  







  

  
    
  
                              ..................
Alig confidence 





























































..................
Template Conservation 
 


 

 






   
                   
                
                       
Template Sequence  RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST
Template Known Secondary structure 



TTSS
TTT


S


TT

BTTT

TT
TT
Template Predicted Secondary structure 



































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   71........80.........90.........100.........110.........120.........130 .........140.......
Predicted Secondary structure  .


















..
Query SS confidence  .



























































. .
















Query Sequence  . DAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFK. . TQMLVTQFETLQEPGAD
Query Conservation  .             

                      
 
         
   
      ..                 
Alig confidence  .































.


























..
















Template Conservation                
          
       .   
         
  

  
       
   
             
Template Sequence  VASVKQVSKSGKTCILDIDMQGVKSVKAIPELN. ARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETG
Template Known Secondary structure  TS

T
GGG
.

S
S
S
TTT
Template Predicted Secondary structure 










.










Template SS confidence 















































































   82.......90.........100.........110.... .....120.........130.........140.........150.........160
 
   148.150.........160.........170.....
Predicted Secondary structure 









Query SS confidence 



























Query Sequence  ETDVLVVDIDQPLEGVVASTIEVIKKGK
Query Conservation        

   
 
 
   
   
  
 
Alig confidence 









..















Template Conservation    
 

 
 
.. 
     
   
  
 
Template Sequence  AHDKVIVNDD. . LDKAYKELKDFIFAEK
Template Known Secondary structure 
SS
SS..T

Template Predicted Secondary structure 





..

Template SS confidence 



























   161........170 .........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions