Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence99.84%DateThu Jan 5 12:04:31 GMT 2012
Rank8Aligned Residues160
% Identity16%Templated1e6ca_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Shikimate kinase (AroK)
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVC
Query Conservation    

 
 
  







  

  
    
  
                                           

  
Alig confidence 













































...






























Template Conservation     
 
 
  







  

  
    
  
             ...                          

   
Template Sequence  TEPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVAD. . . VVAAEGWPGFRRRESEALQAVATPNRVVATG
Template Known Secondary structure 


S
TTSST

S
...

SS

Template Predicted Secondary structure 















...






Template SS confidence 















































































   2.......10.........20.........30.........40....... ..50.........60.........70........
 
   88.90.........100.........110.........120......... 130.........140.........150.........
Predicted Secondary structure 













........







Query SS confidence 









































. . . . . . . .





























Query Sequence  SALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFF. . . . . . . . KTQMLVTQFETLQEPGADETDVLVVDIDQP
Query Conservation                      
 
         
   
     ........                        

   
Alig confidence 














.

























........






















.





Template Conservation                 .    
 
    
    
   
                                   
.

    
Template Sequence  GGMVLLEQNRQFMRA. HGTVVYLFAPAEELALRLQASLQAHQRPTLTGRPIAEEMEAVLREREALYQDVAHYV. VDATQP
Template Known Secondary structure  TTGGGS.S


S




TT
S.TTS
Template Predicted Secondary structure 






.

















.



Template SS confidence 















































































   7980.........90... ......100.........110.........120.........130.........140.........150 ......
 
   160.........170..
Predicted Secondary structure 
Query SS confidence 












Query Sequence  LEGVVASTIEVIK
Query Conservation   
 
   
   
 
Alig confidence 












Template Conservation    
    
   

Template Sequence  PAAIVCELMQTMR
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 












   157..160.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions