Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence98.96%DateThu Jan 5 12:04:31 GMT 2012
Rank132Aligned Residues159
% Identity16%Templated1deka_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50..
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Query Sequence  HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPLTRKEFEGIDYDRETNLNLTKLEVITI
Template Known Secondary structure 

TTSSS


TTSTTSS



TTTTS
TTS




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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   53......60.........70.........80.........90..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKK
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Template Sequence  MEQAFCYLNGKSPIKGVFVFDDEGKESVNFVAFNKITDVINNIEDQWSVRRLMQALGTDLIVNNFDRMYWVKL. . . . . . F
Template Known Secondary structure  TTS

TT

SSS

T

S


TTTT
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   83......90.........100.........110.........120.........130.........140.........150..... .
 
   93......100.........110.........120........ .130.........140.........150.........160.........
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Query Sequence  HYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHF. . . FKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIE
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Template Sequence  ALDYLDKFNSGYDYYIVPDTRQDHEMDAARAMGATVIHVVRPGQKSNDTHITEAGLPIRDGDLVITNDGSLEELFSKIKN
Template Known Secondary structure  TTSS
S



STT

TT


S

SGGGS




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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   170...
Predicted Secondary structure 
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Query Sequence  VIKK
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Template Conservation      
Template Sequence  TLKV
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   237..240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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