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Job DescriptionP46859
Confidence98.12%DateThu Jan 5 12:04:31 GMT 2012
Rank191Aligned Residues159
% Identity13%Templatec3uatA_
PDB info PDB header:peptide binding proteinChain: A: PDB Molecule:disks large homolog 1; PDBTitle: guanylate kinase domains of the maguk family scaffold proteins as2 specific phospho-protein binding modules
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60 .........
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Query Sequence  HDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDD. DRKPWLQAL. . . . . . . . . . . . . . .
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Template Sequence  NYTRPVIILGP. . . MKDRVNDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHL
Template Known Secondary structure  SS


ST...T
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   719720......... 730.........740.........750.........760.........770.........780.........790.....
 
   70.........80.........90.........100.........110.........120.........130.........140.....
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Query Sequence  . . . . NDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPG
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Template Sequence  YGTSVQSVRAVAEKGKHCILDVS. . . GNAIKRLQIAQLYPISIFIKPKSMENIMEMNKRLTDEQARKTFERAVR. LEQEF
Template Known Secondary structure  TTT



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   796...800.........810........ .820.........830.........840.........850.........860...... ...870.
 
   146...150.........160.........170...
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Query Sequence  ADETDVLVVDIDQPLEGVVASTIEVIKK
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Template Sequence  TEHFTAIVQGDT. . LEDIYNQVKQIIEE
Template Known Secondary structure  GGG
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   872.......880... ......890.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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