Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence96.28%DateThu Jan 5 12:04:31 GMT 2012
Rank457Aligned Residues151
% Identity10%Templatec3p1jB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 























.
Query SS confidence 














































































.
Query Sequence  YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSA.
Query Conservation 
 
 
  







  

  
    
  
                                           

    .
Alig confidence 

















...

























































.
Template Conservation 
 


   







 
... 
  
              

 
                                    
Template Sequence  IILVGKTGTGKSAAGNSI. . . LRKTLTKTCSKSQGEIVIIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLG
Template Known Secondary structure  S
...T




S




GGGGSS


TT

STT
Template Predicted Secondary structure 





...























Template SS confidence 















































































   25....30.........40.. .......50.........60.........70.........80.........90.........100.
 
   90.........100.........110.........120.........130.........140.........150........ .
Predicted Secondary structure  ........


















..
Query SS confidence  . . . . . . . .




































































. .
Query Sequence  . . . . . . . . LKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQ. . P
Query Conservation  ........                  
 
         
   
                             

   ..
Alig confidence  ........








































...........
















..
Template Conservation                           


  
 
              
 ...........             

     
Template Sequence  RYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHNGGSLMDYMHDSDNKALS. . . . . . . . . . . KLVAACGGRICAFNNNQDDQ
Template Known Secondary structure 



GGGGGG




...........TTT



Template Predicted Secondary structure 
















...........








Template SS confidence 















































































   117..120.........130.........140.........150.........160..... ....170.........180.....
 
   160.........170.....
Predicted Secondary structure 

Query SS confidence 















Query Sequence  LEGVVASTIEVIKKGK
Query Conservation   
 
   
   
  
 
Alig confidence 















Template Conservation 
 

   
     

 
Template Sequence  VKELMDCIEDLLMEKN
Template Known Secondary structure  TT
Template Predicted Secondary structure 

Template SS confidence 















   195....200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions