Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence98.14%DateThu Jan 5 12:04:31 GMT 2012
Rank185Aligned Residues37
% Identity27%Templatec3h4mC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase
Resolution3.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40
Predicted Secondary structure 
















Query SS confidence 




































Query Sequence  TNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD
Query Conservation        

 
 
  







  

  
    
  
Alig confidence 




































Template Conservation         


 







 

  

  
        
Template Sequence  GIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVV
Template Known Secondary structure  T



SSSSSSSTT
Template Predicted Secondary structure 















Template SS confidence 




































   200.........210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions