Job Description P46859 Confidence 98.30% Date Thu Jan 5 12:04:31 GMT 2012 Rank 154 Aligned Residues 110 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																															.	.	.	.	.																	.	.	.	.	.
Query SS confidence																															.	.	.	.	.																	.	.	.	.	.
Query Sequence		T	N	H	D	H	H	I	Y	V	L	M	G	V	S	G	S	G	K	S	A	V	A	S	E	V	A	H	Q	L	.	.	.	.	.	H	A	A	F	L	D	G	D	F	L	H	P	R	R	N	I	.	.	.	.	.	E	K	M	A	S	G	E	P	L	N	D	D	D	R	K	P	W	L	Q	A	L	N	D	A	A
Query Conservation																															.	.	.	.	.																	.	.	.	.	.
Alig confidence																															.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		K	A	E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I
Template Known Secondary structure		T	S		S										T	T	S	S															T	T										T	T															T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		F	A	M	Q	R	T	N	K	V	S	L	I	V	C	S	A	L	.	.	.	.	.	.	.	.	K	K	H	Y	R	D	L	L	R	E	G	N	P	N	L	S	F	I	Y	L	K	G	D
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L
Template Known Secondary structure								T		S								S	S			S	S	S																S								T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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