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Job DescriptionP46859
Confidence99.77%DateThu Jan 5 12:04:31 GMT 2012
Rank47Aligned Residues167
% Identity17%Templatec3be4A_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: crystal structure of cryptosporidium parvum adenylate kinase cgd5_3360
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60 .........70.........80
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Query Sequence  NHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDD. . . . DRKPWLQALNDAAFAMQRTN
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Template Sequence  NSKKHNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGIGLEAKSIIESGNFVGDEIVLGLVKEKFDLGVCV
Template Known Secondary structure  GGG


TTSS

T


T



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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   81........90........ .100.........110.........120.........
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Query Sequence  KVSLIVCSALKKHYRDLL. . . . . REGNPNLSFIYLKGDFDVIESRLKARKGHFF. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NGFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEIIERISGRCTHPASGRIYHVKYNPPKQPGIDDVTGEPLV
Template Known Secondary structure  T
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T
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B
B
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   130.........140.........150.........160.........170.
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Query Sequence  . . . . . . . . . . . . KTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVI
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Template Sequence  WRDDDNAEAVKVRLDVFHKQTAPLVKFYEDLGILKRVNAKLPPKEVTEQIKKIL
Template Known Secondary structure 

GGGSTTTTT
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   164.....170.........180.........190.........200.........210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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