Return to main results Retrieve Phyre Job Id

Job DescriptionP46859
Confidence99.77%DateThu Jan 5 12:04:31 GMT 2012
Rank48Aligned Residues162
% Identity14%Templatec2jatA_
PDB info PDB header:transferaseChain: A: PDB Molecule:deoxyguanosine kinase; PDBTitle: structure of deoxyadenosine kinase from m.mycoides with2 products dcmp and a flexible dcdp bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  IYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSA
Query Conservation 

 
 
  







  

  
    
  
                                           

    
Alig confidence 











































....































Template Conservation   
 
 
  







  

  
                     ....                                
Template Sequence  KIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKD. . . . LKKTVFKMQIYMLTARSKQLKQLENIIFDRTL
Template Known Secondary structure 
STTSS




TTT
TTTT
....T


SS
T
Template Predicted Secondary structure 















....







Template SS confidence 















































































   2.......10.........20.........30.........40..... ....50.........60.........70.......
 
   90.........100 .........110.........120.........130. ........140..
Predicted Secondary structure 
.....................










......
Query SS confidence 










. . . . . . . . . . . . . . . . . . . . .






























. . . . . .










Query Sequence  LKKHYRDLLRE. . . . . . . . . . . . . . . . . . . . . GNPNLSFIYLKGDFDVIESRLKARKGHFFKT. . . . . . QMLVTQFETLQ
Query Conservation             .....................       
 
         
   
       ......           
Alig confidence 










.....................






























......










Template Conservation                                           
         
   
                        
Template Sequence  LEDPIFMKVNYDLNNVDQTDYNTYIDFYNNVVLLSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLNKNYEEFY
Template Known Secondary structure  TTTTSS
TT



S

S
S
S
Template Predicted Secondary structure 






















Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   143......150.........160.........170.....
Predicted Secondary structure 









Query SS confidence 
































Query Sequence  EPGADETDVLVVDIDQPLEGVVASTIEVIKKGK
Query Conservation             

   
 
 
   
   
  
 
Alig confidence 
































Template Conservation           
 

      
    
   
   
Template Sequence  KQNVYDFPFFVVDAELDVKTQIELIMNKLNSIK
Template Known Secondary structure  TTTTTTTS
TT
Template Predicted Secondary structure 









Template SS confidence 
































   170.........180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions