Job Description P46859 Confidence 98.00% Date Thu Jan 5 12:04:31 GMT 2012 Rank 206 Aligned Residues 159 % Identity 12% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	D	H	H	I	Y	V	L	M	G	V	S	G	S	G	K	S	A	V	A	S	E	V	A	H	Q	L	H	A	A	F	L	D	G	D	F	L	H	P	R	R	N	I	E	K	M	A	S	G	E	P	L	N	D	D	.	D	R	K	P	W	L	Q	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																																						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		H	Y	A	R	P	I	I	I	L	G	P	T	K	D	R	.	.	.	A	N	D	D	L	L	S	E	F	P	D	K	F	G	S	C	V	P	H	T	T	R	P	K	R	E	Y	E	I	D	G	R	D	Y	H	F	V	S	S	R	E	K	M	E	K	D	I	Q	A	H	K	F	I	E	A	G	Q	Y	N	S	H	L
Template Known Secondary structure			S								S	T	T				.	.	.										T	T	T										S				T	T			B	T	T	T	B				S											T	T									T	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	N	D	A	A	F	A	M	Q	R	T	N	K	V	S	L	I	V	C	S	A	L	K	K	H	Y	R	D	L	L	R	E	G	N	P	N	L	S	F	I	Y	L	K	G	D	F	D	V	I	E	S	R	L	K	A	R	K	G	H	F	F	K	T	Q	M	L	V	T	Q	F	E	T	L	Q	E	P	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																				.	.	.																																																	.
Template Conservation																									.	.	.																																																	.
Template Sequence		Y	G	T	S	V	Q	S	V	R	E	V	A	E	Q	G	K	H	C	I	L	D	V	S	.	.	.	A	N	A	V	R	R	L	Q	A	A	H	L	H	P	I	A	I	F	I	R	P	R	S	L	E	N	V	L	E	I	N	K	R	I	T	E	E	Q	A	R	K	A	F	D	R	A	T	K	.	L	E	Q	E	F
Template Known Secondary structure															T	T									.	.	.	T	T								T	T											S	S									T	T	S															.
Template Predicted Secondary structure																									.	.	.																																																	.
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.				.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.		680	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	E	T	D	V	L	V	V	D	I	D	Q	P	L	E	G	V	V	A	S	T	I	E	V	I	K	K
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		T	E	C	F	S	A	I	V	E	G	D	.	.	S	F	E	E	I	Y	H	K	V	K	R	V	I	E	D
Template Known Secondary structure		G	G	G		S						S	.	.	S
Template Predicted Secondary structure													.	.
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.			.	.	.	.	700	.	.	.	.	.	.	.	.	.	710

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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