Job Description P28904 Confidence 92.59% Date Thu Jan 5 11:45:17 GMT 2012 Rank 232 Aligned Residues 118 % Identity 16% Template d2gjxa1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases beta-N-acetylhexosaminidase catalytic domain Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	P	Q	V	D	N	G	Y	D	V	.	.	.	.	.	.	.	.	.	.	A	N	Y	T	A	I	D	P	T	Y	G	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L	D
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		P	L	S	S	I	L	D	T	L	D	V	M	A	Y	N	K	L	N	V	F	H	W	.	.	.	.	.	H	L	V	D	D	P	S	F	P	Y	E	S	F	T	F	P	E	L	M	R	K	G	S	Y	N	P	V	T	H	I	Y	T	A	Q	D	V	K	E	V	I	E	Y	A	R	L	R	G	I	R	V	L	A	E
Template Known Secondary structure																T	T							.	.	.	.	.					S	S				B			S	S		T							S	S		T	T	T	S		B															T	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		101		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		M	.	V	F	N	H	T	S	T	Q	H	A	W	F	R	E	A	L	N	K	E	S	P	Y	R	Q	F	Y	I	W	R	D	G	E	P	E	T	P	P	N	N	W	R	S	K	F	G	G	S	A	W	R	W	H	A	E	S	E	Q	Y	Y	L	H	L	F	A	P	E	Q	A	D	L	N	W	E	N	P	A	V	R
Query Conservation			.
Alig confidence			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	T	P	G	H	T	L	S	W	G	P	G	I	P	G	L	L	T	P	C	Y	S	G	S	E	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	G	P	V	N	P	S	L	N	N	T	Y
Template Known Secondary structure					S	S	S		T	T	T	T	T	T	S	T	T							S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.																																							.	.	.	.	290	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	K	K	V	C	E	F	W	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	M	S	T	F	F	L	E	V	S	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions