Return to main results Retrieve Phyre Job Id

Job DescriptionP28904
Confidence94.64%DateThu Jan 5 11:45:17 GMT 2012
Rank212Aligned Residues69
% Identity13%Templated2fhfa4
SCOP infoGlycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   482.......490........ .500.........510.........520... ......530.........540..
Predicted Secondary structure 







..........











.........












Query SS confidence 
















. . . . . . . . . .
























. . . . . . . . .


















Query Sequence  PNSPVLWCYRREWKGQT. . . . . . . . . . LLVIANLSREIQPWQAGQMRGNWQL. . . . . . . . . VMHNYEEASPQPCAMNLRP
Query Conservation       
 
  
      .......... 


 
         
         .........                
 
Alig confidence 
















..........














.








.........


















Template Conservation   
 










   
 



  
 







  


  .        




    
  
      
  
 




Template Sequence  DQQTGLLVMTIDDGMQAGASLDSRVDGIVVAINAAPESRTLQ. DFAGTSLQLSAIQQAAGDRSLASGVQVAADGSVTLPA
Template Known Secondary structure  T

TT
STTTSS
S
TT
SSS

.TTSSS


TGGGSTTTT

TTS

T
Template Predicted Secondary structure 


























.


















Template SS confidence 















































































   982.......990.........1000.........1010.........1020... ......1030.........1040.........1050.........1060
 
   543......550.
Predicted Secondary structure 

Query SS confidence 








Query Sequence  FEAVWWLQK
Query Conservation       
   
Alig confidence 








Template Conservation   





  
Template Sequence  WSVAVLELP
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 








   1061........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions