Return to main results Retrieve Phyre Job Id

Job DescriptionP28904
Confidence79.94%DateThu Jan 5 11:45:17 GMT 2012
Rank306Aligned Residues72
% Identity15%Templated1jaea1
SCOP infoGlycosyl hydrolase domain Glycosyl hydrolase domain alpha-Amylases, C-terminal beta-sheet domain
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   476...480.........490.........500.........510.........520...... ...530.........540....
Predicted Secondary structure 





















...........












Query SS confidence 


















































. . . . . . . . . . .

















Query Sequence  NYQDLLPNSPVLWCYRREWKGQTLLVIANLSREIQPWQAGQMRGNWQLVMH. . . . . . . . . . . NYEEASPQPCAMNLRPFE
Query Conservation             
 
  
       


 
         
            ...........             
 
  
Alig confidence 
















..































...........

















Template Conservation   
 

 
 
 
 


 
..
 







      

 
 



 






    
 


 



  

 
   
    
Template Sequence  QVENWWSNDDNQIAFSR. . GSQGFVAFTNGGDLNQNLNTGLPAGTYCDVISGELSGGSCTGKSVTVGDNGSADISLGSAE
Template Known Secondary structure 

SSS..TTTSSS




S
TTT

TTSS

TTS
TTS
Template Predicted Secondary structure 







..

































Template SS confidence 















































































   381........390....... ..400.........410.........420.........430.........440.........450........
 
   545....
Predicted Secondary structure  ..
Query SS confidence  . .




Query Sequence  . . AVWWL
Query Conservation  ..   
 
Alig confidence  ..




Template Conservation     



Template Sequence  DDGVLAI
Template Known Secondary structure  S
S
Template Predicted Secondary structure 


Template SS confidence 






   459460.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions