Job Description P28904 Confidence 99.97% Date Thu Jan 5 11:45:17 GMT 2012 Rank 105 Aligned Residues 188 % Identity 23% Template d1iv8a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.90

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.
Predicted Secondary structure																														.																																																.	.
Query SS confidence																														.																																																.	.
Query Sequence		D	L	R	G	V	I	Q	H	L	D	Y	L	H	K	L	G	V	D	A	I	W	L	T	P	F	Y	V	S	.	P	Q	V	D	N	G	Y	D	V	A	N	Y	T	A	I	D	P	T	Y	G	T	L	D	D	F	D	E	L	V	T	Q	A	K	S	R	G	I	R	I	I	L	D	M	V	F	N	H	.	.	T	S
Query Conservation																														.																																																.	.
Alig confidence														.																.																																																.	.
Template Conservation														.
Template Sequence		N	F	G	D	V	I	D	N	L	W	Y	F	.	D	L	G	V	S	H	L	Y	L	S	P	V	L	M	A	S	P	G	S	N	H	G	Y	D	V	I	D	H	S	R	I	N	D	E	L	G	G	E	K	E	Y	R	R	L	I	E	T	A	H	T	I	G	L	G	I	I	Q	D	I	V	P	N	H	M	A	V	N
Template Known Secondary structure									T	T	T	T		.																	T	T		S	S			S									T	T	T	T															T	T										S
Template Predicted Secondary structure														.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	H	A	W	F	R	E	A	L	N	K	E	S	P	Y	R	Q	F	Y	I	W	R	D	G	E	P	E	.	.	.	.	.	.	T	P	P	N	N	W	R	S	K	F	G	G	S	A	W	R	W	H	A	E	S	E	Q	Y	Y	L	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		S	L	N	W	R	L	M	D	V	L	M	.	.	G	S	Y	Y	T	Y	F	D	F	F	P	E	D	D	K	I	R	L	P	I	L	G	E	D	L	D	T	V	I	S	K	G	L	L	K	I	V	K	D	G	D	E	Y	F	L	E	Y	F	K	W	K	L	P	L	T	E	V	G	N	D	I	Y	D	T	L	Q	K
Template Known Secondary structure		T	T										.	.				G	G	G	B		B		T	T		S	S							S	S								T	T								S	S							T	T						S				S	S						T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
																				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	P	E	Q	A	D	L	N	W	E	N	P	A	V	R	A	E	L	K	K	V	C	E	F	W	A	D	R	G	V	D	G	L	R	L	D	V	V	N	L	I	S	K	D	P	R	F	P	E	D	L	D	G	D	G	R	R	F	Y	T	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	Y	T	L	M	S	W	K	N	P	P	S	Y	R	R	F	F	D	V	N	T	L	I	G	V	N	V	E	D	H	.	.	.	.	.	V	F	Q	E	S	H	S	I	L	D	L	D	V	D	G	Y	R	I	D	H	I	D	G	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S						T	T	S			S	B				T	T							B						.	.	.	.	.						T			T	T	S			S					T	T	G	G	G		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	R	A	H	E	F	L	H	E	M	N	R	D	V	F	T	P	R	G	L	M	T	V	G	E
Query Conservation
Alig confidence		.	.														.	.	.	.
Template Conservation		.	.														.	.	.	.
Template Sequence		.	.	D	P	E	K	Y	I	N	D	L	R	S	I	I	.	.	.	.	K	N	I	I	I	V	E
Template Known Secondary structure		.	.														.	.	.	.
Template Predicted Secondary structure		.	.														.	.	.	.
Template SS confidence
				235	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions